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scnpilot_solids1_trim150_scaffold_7393_curated_3

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(2505..2750)

Top 3 Functional Annotations

Value Algorithm Source
NodT family RND efflux system outer membrane lipoprotein id=12494317 bin=THIO_HI species=Sphingobium xenophagum genus=Sphingobium taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 82.0
  • Bit_score: 161
  • Evalue 3.50e-37
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12853.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 72.0
  • Bit_score: 84
  • Evalue 1.00e-13
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 73.0
  • Bit_score: 81
  • Evalue 1.50e-13

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Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
ATGAGTACGCACAGATCACAGATATTCCGCGTCCAGCGCCGCCTTGCGGAAACCGCGCGGCTGCGCTATGACAACGAGAGCACGCTCTACCTCGAAGTCCTCGACGCGGAACGCAATCGGTTCGCCAGTGAACAGCAGTTCCTGCAGTTGCACAGCGCCGAACTCCAGAACGCCGTCTCGCGCCATATCGCGCTGGGCGGCGGCCTGCGGGAAGGTGATGTGCCGCCGGATCGAAGATCGAAGTGA
PROTEIN sequence
Length: 82
MSTHRSQIFRVQRRLAETARLRYDNESTLYLEVLDAERNRFASEQQFLQLHSAELQNAVSRHIALGGGLREGDVPPDRRSK*