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scnpilot_solids1_trim150_scaffold_2615_curated_6

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(4789..5793)

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase {ECO:0000313|EMBL:EYR66631.1}; EC=1.1.1.41 {ECO:0000313|EMBL:EYR66631.1};; TaxID=1444315 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 334.0
  • Bit_score: 609
  • Evalue 2.80e-171
icd; isocitrate dehydrogenase (EC:1.1.1.41); K00030 isocitrate dehydrogenase (NAD+) [EC:1.1.1.41] similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 335.0
  • Bit_score: 561
  • Evalue 2.60e-157
isocitrate dehydrogenase n=1 Tax=Arenimonas oryziterrae RepID=UPI0003B2FB76 similarity UNIREF
DB: UNIREF100
  • Identity: 85.4
  • Coverage: 335.0
  • Bit_score: 567
  • Evalue 1.10e-158

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Taxonomy

Lysobacter capsici → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGACAACGATCACGGTCATCCGCGGCGACGGCATCGGCCCGGAAATCATGGACGCCACCCTGCACGTGCTGGACGCGATGCAGCTGGGCCTTTCGTACGAGTACGCGGACGCCGGCATGGTCGCGCTGGAGAAGCACGGTGACCTGCTGCCGGCGGCGACCATGGATTCGATCCGCAAGAACAAGATCGCGCTGAAGTCGCCCCTGACCACCCCGGTGGGCGGCGGGTTCTCCTCGATCAACGTCGAGCTGCGCAAGCGCTTCGACCTGTACGCCAACGTGCGACCGGCCAAGTGCTTCCCGAACACCAAGTCGCGCTTCAGCGGCGGCGTCGACCTGATCACCGTGCGCGAGAACACCGAAGGCGCCTACATCGGCGAGGGCCAGAGCGTTTCCGAGGATGGCGAGACCGCGGTGCTGACCCAGAAGGTCACCCGCAAGGGCTCCGAGCGCATCGTCCGCTACGCCTTTGACCTGGCTCGCAAGACCGGCCGCAAGAAGGTCACGGTGGTGCACAAGGCCAACATCCTGAAGTCCACGTCCGGCCTGTTCCTCAAGACCGCGCGCGAAGTGGCGACGCAGTACCCCGACATCGAGTGCAACGAGATGATCGTGGACAACACCTGCATGCAGCTGGTGATGAAGCCGGAGCAGTTCGACATCATCGTCACCACCAACCTGTTCGGCGACATCATCTCCGACCTCTGTGCCGGCCTGGTCGGCGGCCTGGGCCTGGCGCCCGGCGCCAACATCGGTACCGACGTGGCGATCTTCGAAGCCGTGCATGGCTCCGCCCCGGACATCGCCGGCAAGGGTGTTGCCAACCCGTGCGCGCTGCTGCTGGGCGCGGCGCAGATGCTGGACCATCTTGGCAAGCCGGATCAGGCCACCCGGCTGCGCGAGGCCATCGTCGCCACGCTGGAAGCCAGGGATTCGCTGACCCCGGACCTGGGTGGCGAGGGCAACACGATGTCGTTCGCCAAGGCGATCGCGTCGCGCCTGTAA
PROTEIN sequence
Length: 335
MTTITVIRGDGIGPEIMDATLHVLDAMQLGLSYEYADAGMVALEKHGDLLPAATMDSIRKNKIALKSPLTTPVGGGFSSINVELRKRFDLYANVRPAKCFPNTKSRFSGGVDLITVRENTEGAYIGEGQSVSEDGETAVLTQKVTRKGSERIVRYAFDLARKTGRKKVTVVHKANILKSTSGLFLKTAREVATQYPDIECNEMIVDNTCMQLVMKPEQFDIIVTTNLFGDIISDLCAGLVGGLGLAPGANIGTDVAIFEAVHGSAPDIAGKGVANPCALLLGAAQMLDHLGKPDQATRLREAIVATLEARDSLTPDLGGEGNTMSFAKAIASRL*