ggKbase home page

scnpilot_solids1_trim150_scaffold_7771_curated_5

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(3026..3463)

Top 3 Functional Annotations

Value Algorithm Source
Tol biopolymer transport system, TolR protein {ECO:0000313|EMBL:KGQ18811.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 140.0
  • Bit_score: 157
  • Evalue 1.30e-35
Probable biopolymer transport tolr protein id=2509448 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Xanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 142.0
  • Bit_score: 153
  • Evalue 1.30e-34
TolR protein; K03560 biopolymer transport protein TolR similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 141.0
  • Bit_score: 148
  • Evalue 1.70e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
GCCACCGCTTCTCCCCGTCGCGCGCGCAAGCGCAGGCTCAAGGCCGAGATCAACGTCGTTCCCTACATCGACGTGATGCTGGTGCTGTTGATCATCTTCATGGTCACCGCGCCGCTGCTCAACGTGGGCGTGGACGTCAACCTGCCGCAGGCCGATGCCAAGACGCTGGAGCAGAAAAAGAAGCAGCCGGTGGTGGTGCAGGTCGGCAAGGACGGGGCGCTGGCGCTGACCTATGAAGGCGTGGATCGGCCGCAGGCGGTGGATGCACAGCAGCTGGTGGCGAAGGTGCGCGCGTTCGTGGAGGCTGACCCGGAGCTGGCGGTGTACGTGGCCGGCGACCGCGACGTCAGTTATCAGTCCGTCTATGAAATCCTGTCGCTGCTGCAGCGCGATGCCAAGGTCTCGCGCGCCGGGCTGATGGGCGAACCGAAGCCGTGA
PROTEIN sequence
Length: 146
ATASPRRARKRRLKAEINVVPYIDVMLVLLIIFMVTAPLLNVGVDVNLPQADAKTLEQKKKQPVVVQVGKDGALALTYEGVDRPQAVDAQQLVAKVRAFVEADPELAVYVAGDRDVSYQSVYEILSLLQRDAKVSRAGLMGEPKP*