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scnpilot_solids1_trim150_scaffold_6990_curated_6

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 3291..3728

Top 3 Functional Annotations

Value Algorithm Source
multidrug RND transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030C0F1A similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 144.0
  • Bit_score: 184
  • Evalue 9.00e-44
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 133.0
  • Bit_score: 177
  • Evalue 2.70e-42
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADV26840.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 133.0
  • Bit_score: 177
  • Evalue 1.20e-41

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGCCGCGACTTTCGATTCTTGCCACCGCCTTGGGCGGTGCCTTGCTGGTGGCCGGTTGTGCCAGCACCGCCGGGTTCGCGCCGCAGGGCGCACCACGCGACCCCGCCACCCTCGCCACCGGCCTTGCCCTGGCCGGCGCGCCACTATCGCCCGCCGCCTGGCCCAGCGAACGCTGGTGGACCGCGTTCGGCGATACCCAGCTCGACGCGCTGGTCGATGAGGCGCTGGCAGGCACGCCCTCGCTGGACGCCGCCGAGGCGCGGGTCCGCAAGGCGCAGGCACAGGCTGGATTGGCCGACGCCGCGCGCAAGCCCAGCGTGGGCGGCGGCGCGCAGTACGCGGTGGCCCAGCTGCCGGCGGGGCTGGCCGGCGAAGAGCTGGGCGGCCAGCTGATGCACAACGCGGTGCTGACCCTGAAATTCGACTGGCCGCTGGAC
PROTEIN sequence
Length: 146
MPRLSILATALGGALLVAGCASTAGFAPQGAPRDPATLATGLALAGAPLSPAAWPSERWWTAFGDTQLDALVDEALAGTPSLDAAEARVRKAQAQAGLADAARKPSVGGGAQYAVAQLPAGLAGEELGGQLMHNAVLTLKFDWPLD