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scnpilot_solids1_trim150_scaffold_30590_curated_2

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: comp(255..1295)

Top 3 Functional Annotations

Value Algorithm Source
multidrug RND transporter n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI00030C0F1A similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 345.0
  • Bit_score: 456
  • Evalue 2.90e-125
NodT family RND efflux system outer membrane lipoprotein similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 350.0
  • Bit_score: 456
  • Evalue 9.20e-126
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ADV26840.1}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 350.0
  • Bit_score: 456
  • Evalue 4.10e-125

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
GTGCTGACCCTGAAATTCGACTGGCCGCTGGACGTATGGGGCGGCAAGCGCGCCGACTACCTTGCGGCGCTGGGCCAGGCCCGCGCCAGCGAAGTCGACGCGCAGGCCGCGCGGCTGTCGCTGGCGGCCAACGTGGCGCGCAGCTACGTCGCGCTGGCGCAGGCGTTCGATGATCTCGACCTGGCCCGCCGCGAGCAGGCGCGCACCGGCGACCTGGTGGCGCTGGGCAAGCAGCGCATCGCCGCCGGATTGGACAACGATGCCGCCCTGCGCGGCAATGAGGCCCTGGCCGCCACCGCCACGGCACAGGCGGACGCCGCGCAGCACCGCATCGATGCGCTGCGCAACGCGCTGGCCGCGCTGCTGGGGCAAGGCCCCGATCGCGGCTTGGCGATCCAGCGCCCGCACCTGCTCGAGACTCCGGCCCCGGCGCTGCCGTCGGTGCTGCCCAGCGAACTGCTGGGGCATCGCCCGGACGTCGTCGCGGCGCGCTGGCGGGTGGAAGCGGCCGCGCAGGACATCACTTCCGCGAAGGCACGGTTCCGACCCAGCATCGACCTGAGCGGCCTGGTCGGGCTTGCCGCCACCGGCTTCAAGGGCCTGTTCGACAGCGACGCCTTCCTCGGCTTCGGCGGTCCCGCGCTGAGCCTGCCGATCTTCGACGGCGGCCAACTGCGCAGCAACCTGGCCGCGCGCGATGCCGATTACGACCTCGCCGTGGCGGAGTACAACCGGACCGTCGTCGAAGGCCTGCGCCAGGTCACCGACGCGGTGCAGGCCATACGCGCGCTGGACGCCCAGGCGGCCGCGCTGGAACAGGCCCGAAGCGCCGCCGCCGCCGCCGCGCAGGTGGTCGAGCAGCGCCAGCGCGCCGGTCTGGCCAACCGGCTCGACCTGCTGGCGGCACGCAAGCCGCTGCTGCAGGCGGAGCAACAGCTGGCGGCCGTACGCAGCCAGCGCTACGCCGCGGCCATCGACCTCGACCAGGCGCTGGGCGGCGGCATCGCCGCCACCGCGCCCACTCCCATCGCCTCCCACTGA
PROTEIN sequence
Length: 347
VLTLKFDWPLDVWGGKRADYLAALGQARASEVDAQAARLSLAANVARSYVALAQAFDDLDLARREQARTGDLVALGKQRIAAGLDNDAALRGNEALAATATAQADAAQHRIDALRNALAALLGQGPDRGLAIQRPHLLETPAPALPSVLPSELLGHRPDVVAARWRVEAAAQDITSAKARFRPSIDLSGLVGLAATGFKGLFDSDAFLGFGGPALSLPIFDGGQLRSNLAARDADYDLAVAEYNRTVVEGLRQVTDAVQAIRALDAQAAALEQARSAAAAAAQVVEQRQRAGLANRLDLLAARKPLLQAEQQLAAVRSQRYAAAIDLDQALGGGIAATAPTPIASH*