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scnpilot_solids1_trim150_scaffold_31046_curated_1

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 1..1203

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 401.0
  • Bit_score: 758
  • Evalue 3.40e-216
rpoB; DNA-directed RNA polymerase, beta subunit protein (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 401.0
  • Bit_score: 743
  • Evalue 4.40e-212
DNA-directed RNA polymerase subunit beta n=1 Tax=Xanthomonas RepID=UPI0003706C19 similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 401.0
  • Bit_score: 745
  • Evalue 2.80e-212

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Taxonomy

Lysobacter arseniciresistens → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
CGCAATGGCCGCGGCGTGGTGGACGACATCGACCATCTGGGCAACCGTCGCGTGCGCTCGGTCGGTGAAATGGCCGAGAACGTGTTCCGCGTGGGCCTGGTCCGCGTCGAGCGCGCGGTGAAGGAGCGCCTGTCGATGGCCGAGTCCGAAGGCCTGACCCCGCAGGAGCTGATCAACGCCAAGCCGGTGGCGGCCGCGATCAAGGAGTTCTTCGGCTCCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTGACCCACAAGCGCCGCGTCTCGGCGCTGGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAAGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACCATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCGGTGTTCGCCCGCACCAACCGCTACGGCTTCCTCGAGACGCCGTACCGCAAGGTCGTGGACGGCCGCGTCACCGACGAGATCGAGTTCCTGTCGGCGATCGAGGAAAACGAGTACGTCATCGCCCAGGCCAACGCGCCGCGCGACGAGAAGGGCAACATCTCCGCGCAGTTCGTGGCGTGCCGCTTCCAGGGTGAAAACCTGCTGAAGCCGCCGAGCGAGATCCACTTCATGGACGTCTCGCCGATGCAGACCGTGTCGGTCGCGGCCGCGCTGGTGCCGTTCCTCGAGCACGACGACGCCAACCGCGCGCTGATGGGCGCCAACATGCAGCGCCAGGCCGTGCCGACCCTGCGTGCGCAGAAGCCGCTGGTGGGTACCGGCATCGAGCGTGCGCTGGCCCGCGACTCGGGCGTGACCGTGAACGCCCGCCGTGGCGGCGTGGTCGAGCAGATCGACGCCGGCCGCATCGTCGTCAAGGCGCACGAGTCGGAAATCTCCGGCGAGCACGATGCCGGCGTGGACATCTACTCCCTGGTCAAGTACACCCGCAGCAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAACGTGGGCGACGTGGTGGCGCGCGGCGACGTGCTGGCCGACGGCCCGTCCACCGACATCGGCGAGCTGGCCCTGGGCCAGAACATGCTGATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGACTCGATCCTGCTCTCCGAGCGCGTGGTCGAGGAGGATCGCTACACCACGATCCACATCGAAGAG
PROTEIN sequence
Length: 401
RNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVFARTNRYGFLETPYRKVVDGRVTDEIEFLSAIEENEYVIAQANAPRDEKGNISAQFVACRFQGENLLKPPSEIHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERALARDSGVTVNARRGGVVEQIDAGRIVVKAHESEISGEHDAGVDIYSLVKYTRSNQNTCINQRPLVNVGDVVARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEE