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scnpilot_solids1_trim150_scaffold_1741_curated_5

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 2087..2386

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L23 n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002F98405 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 90.0
  • Bit_score: 149
  • Evalue 2.20e-33
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 97.0
  • Bit_score: 174
  • Evalue 9.00e-41
50S ribosomal protein L25; K02892 large subunit ribosomal protein L23 similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 98.0
  • Bit_score: 148
  • Evalue 1.20e-33

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGAGCGCCGCAAACCTGTACGAAGTGATCCGTGCGCCGCGCGTGTCCGAAAAGACCGCGCGCCTGCAGGAAGTCTCCAACCAATACGTCTTCGAAATCGCGAAGACCGCCACCAAGGCTGATGTCAAGGCTGCGGTCGAGAAGATTTTCGACGTCAAGGTCGAGGCGGTCAACGTGGTGAACGTGAAGGGCAAGTCCAAGTCCTTCAAGTTCCGCCAGGGCCGTCGCGGCGACTGGCGCAAGGCGTACGTCACCCTGGCCGAAGGCCAGGCGATCGACGTGATGACGGCCTCGGCCTGA
PROTEIN sequence
Length: 100
MSAANLYEVIRAPRVSEKTARLQEVSNQYVFEIAKTATKADVKAAVEKIFDVKVEAVNVVNVKGKSKSFKFRQGRRGDWRKAYVTLAEGQAIDVMTASA*