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scnpilot_solids1_trim150_scaffold_39402_curated_1

Organism: solids_Lysobacter_1

partial RP 26 / 55 MC: 1 BSCG 26 / 51 ASCG 2 / 38
Location: 1..588

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:KGQ17793.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 193.0
  • Bit_score: 267
  • Evalue 2.00e-68
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) id=2671156 bin=GWF1_Xanthomonadales_69_6 species=unknown genus=Delftia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 195.0
  • Bit_score: 215
  • Evalue 3.80e-53
hipothetical sensory box/GGDEF family protein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 189.0
  • Bit_score: 173
  • Evalue 8.80e-41

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
GAGCGTTACCGGCTGGGCCCGCGCCTGGACCGCCACGTGCTGGATGAGGTGCTGGACTGGCTGGATGCACACCGCGCCGCGGCGGCGCAGATCGGCCAGTGCAACATCAACCTCGGCGCCGCCACCCTGGCCGACGACGAGTTCGCGGATTACGCCGCCGGCCGCTTGCGCCACAGCCCGCTGGGGCCGGGCCAGCTGTGTCTTGAAATCACCGAAACCAGCGTGGTCCGCGACCTCACCCGCACCCGCCGCTTCATCGCCCGCATGCGCGAACTGGGTTGCCAGTTCGCGCTGGACGACTTCGGCACCGGCTTCTGCTCGTTCGGCTACCTGCGCGACCTGCAGGTGGACTACCTCAAGATCGATGGCGGCTTCGTCCGCGACCTCGCGGAATCGCGGCTGTCGGAGGCGGTGGTGCGTTCGATCACCGAGATTGCCCACCTGCTGGACATGCGTGCGGTGGGCGAGCAGGTGGAAACCGAGGAGCAGCTAAACCGGCTGCAGGCGCTGCAGGTGGACTACGCGCAGGGTTACGTGTTCCAGCGGCCGGTGCCGATCGCCGATTTCTTCGGCCTGCCCAACGGCTGA
PROTEIN sequence
Length: 196
ERYRLGPRLDRHVLDEVLDWLDAHRAAAAQIGQCNINLGAATLADDEFADYAAGRLRHSPLGPGQLCLEITETSVVRDLTRTRRFIARMRELGCQFALDDFGTGFCSFGYLRDLQVDYLKIDGGFVRDLAESRLSEAVVRSITEIAHLLDMRAVGEQVETEEQLNRLQALQVDYAQGYVFQRPVPIADFFGLPNG*