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scnpilot_solids1_trim150_scaffold_6489_curated_1

Organism: solids_Micrococcales_1

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38
Location: 2..421

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031C6F46 similarity UNIREF
DB: UNIREF100
  • Identity: 52.7
  • Coverage: 131.0
  • Bit_score: 140
  • Evalue 1.10e-30
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92268.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.9
  • Coverage: 137.0
  • Bit_score: 153
  • Evalue 3.00e-34
GAF sensor signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 132.0
  • Bit_score: 76
  • Evalue 8.00e-12

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Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 420
GCGCCGCTGACGCCGATGCAGGCTGTTGCACCCGAGGACGTCGTGGCAGCCGCTCAGCGCGCGGGGTTTCCCGTCGTGCTCAGCCGCACCGGCGTCCCCGTCGAGCAGCCGTCCATACGGTATGCGGTCGGGCGCATCGTGCAGGAGGGCCTGACCAATGCCATGCGGCACGCCCCCGCCGCACACAGCATCCGCGTGCATCTGGTCACCGCAGGCGATCGCATCGTTGTGACCGTCGCCAACGACGGCGTGACCGCAACGGCCAGCGCCGGCGGCTTCGGCATCCGCGGCCTCGTCGAGCGCGCCCGGCACGTCGGCGGAACGCTCACCAGCGCCGCCGACGGCGACGGACGGTGGCTGCTGCGCGCGGAGCTCCCCCTCATCGACACGCCCACCACCGATCAGAAGGCACCATCATGA
PROTEIN sequence
Length: 140
APLTPMQAVAPEDVVAAAQRAGFPVVLSRTGVPVEQPSIRYAVGRIVQEGLTNAMRHAPAAHSIRVHLVTAGDRIVVTVANDGVTATASAGGFGIRGLVERARHVGGTLTSAADGDGRWLLRAELPLIDTPTTDQKAPS*