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scnpilot_solids1_trim150_scaffold_23369_curated_2

Organism: solids_Micrococcales_1

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38
Location: 1718..2431

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 234.0
  • Bit_score: 362
  • Evalue 4.20e-97
truA; pseudouridylate synthase; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] similarity KEGG
DB: KEGG
  • Identity: 73.8
  • Coverage: 237.0
  • Bit_score: 346
  • Evalue 7.10e-93
tRNA pseudouridine synthase A n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NEJ4_MICTS similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 237.0
  • Bit_score: 346
  • Evalue 2.20e-92

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 714
GTGGTTGCCGGGCGCACCGACGCCGGGGTGCATGCTCGTGGCCAGGTCGCGCACTTAGACCTCGACGATGAGCAGCGGGAACGGCTGTTCACGCGCACGCGGCGGGACGGCGCGGGAGATCCGGTCGAGCGTCTTGCCTATCGCGTGCGCGGGGCGCTGGGCGCCTACTCCGACGTCACCGTGCGTCGCACGCAGATCGCGCCCGACGGGTTCGACGCCCGGTTCTCGGCGGTGTGGCGGCGCTATGAGTACCGGGTCGCGGATCAGATCAGCGGCTACGACCCGCTGGAGCGGGCCCGCACGACCACCGTGCGCGGGGCGCTCGACGTGGATGCGATGGATGCCGCGGCGCGGTCGCTCATCGGATTGCACGACTTCGCGGCGTACTGCAAGCCGCGCGACGAGGCGACCACGATCCGCACCCTGCTGGAGTTCGACTGGCGCCGGGAGGCCGACGGCGTGCTGGTGGCCAACATACGCGCCGACGCGTTCTGCCACTCCATGGTGCGGGCGCTGGTGGGCGCGTGCGTGGCGGTCGGCGACGGCCGGCTGTCGGTCGGGGATGCGGCGACGCTGCGCGACGCGGGGGAACGGACCAGCGCCTTCGCTGTGCTTGCCGCACGTGGTCTCACCCTGGCCGAGGTCGGCTATCCCGCCGACGATCTGCTCGCGGCGCGGGCCGAGCAGACCCGCGCGCGCCGCGACGCGGAGTAG
PROTEIN sequence
Length: 238
VVAGRTDAGVHARGQVAHLDLDDEQRERLFTRTRRDGAGDPVERLAYRVRGALGAYSDVTVRRTQIAPDGFDARFSAVWRRYEYRVADQISGYDPLERARTTTVRGALDVDAMDAAARSLIGLHDFAAYCKPRDEATTIRTLLEFDWRREADGVLVANIRADAFCHSMVRALVGACVAVGDGRLSVGDAATLRDAGERTSAFAVLAARGLTLAEVGYPADDLLAARAEQTRARRDAE*