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scnpilot_solids1_trim150_scaffold_11342_curated_3

Organism: solids_Micrococcales_1

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38
Location: comp(2458..2631)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=369723 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.0
  • Coverage: 41.0
  • Bit_score: 54
  • Evalue 6.00e-05
Ribonuclease VapC n=1 Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X9G8_SALTO similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 41.0
  • Bit_score: 54
  • Evalue 4.30e-05
PilT domain-containing protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 61.0
  • Coverage: 41.0
  • Bit_score: 54
  • Evalue 1.40e-05

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Taxonomy

Salinispora tropica → Salinispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 174
ATCCTGACCGAGCTTCTGCTCGCCCGCGGCCGTTCGCCCCGAGGGCGTGTGGCCGACATCCTCATCGCCGCCGTCGCGCACTCCCGCGATGCCGCGGTCATCACGCACAATGTGAAGGACTTCGCAGGACTTGAATCCGTGCTGACGATGATCCCCGCCGCCACGGTCGGATGA
PROTEIN sequence
Length: 58
ILTELLLARGRSPRGRVADILIAAVAHSRDAAVITHNVKDFAGLESVLTMIPAATVG*