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scnpilot_solids1_trim150_scaffold_6708_curated_3

Organism: solids_Micrococcales_1

partial RP 24 / 55 BSCG 24 / 51 MC: 2 ASCG 8 / 38
Location: 1127..3724

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 868.0
  • Bit_score: 1334
  • Evalue 0.0
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 866.0
  • Bit_score: 1317
  • Evalue 0.0
transcription-repair coupling factor n=1 Tax=Microbacterium yannicii RepID=UPI0002E99FBC similarity UNIREF
DB: UNIREF100
  • Identity: 77.6
  • Coverage: 871.0
  • Bit_score: 1329
  • Evalue 0.0

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2598
GTGACAGTTCCCGGGATCGCGCGCGCCCTCGCGCAGGCCGATGCGGTGCGGGAGGCGCTGACCGCGGCATCCGTCGACACTGATTTCTCCCTGGTCGAGGGCTTGAACGCGCCGGTGCTGGCAGCGCTCGTCGAGCGCCGCCGCGCCGCCGGTCACCCGGCCGCCCTGCTGGTGATCACACCCACCAGCCGGCGGGCCGAGACGGTGGGTCCGGCGCTGGGCGAGCTGCTTCCCGGCGCTACGGTCGTGCACTTCCCCGCCTGGGAGACGCTGCCGCACGAACGGCTCAGCCCCAGCGCGGAGACCGTCGGGCGGCGGCTGGACGCGCTCCGACGCGCGCGGGAGTGGTCCCAGGCGCCGGATTCTGGGCCGCTGGTGATCACCGCCTCGGTGCGGGGGGCGCTGCAGCCACTGGCCGCCGGTCTGGACGAGGTCGCCCCGATCGTGCTGGCGGTCGGCTCGCGCGGGCACGATCTCTCGGCCGTGTCGGCCGAGCTCGTGCAGCGAGCGTACCTGCGCGTGGACATGGTCTCCCGTCGCGGAGAATTCGCCGTGCGCGGCGGCATCCTCGACGTGTTCCCGCCCACCGCCGACCATCCGTTGCGCATCGAGTTCTTCGGCGACGAGATCGACCAGATCCGTGCGTTCTCGGTGACCGACCAGCGCAGCCTGCCCGATGAGACCGGCCGCGTGCAGCTGCTGCCCAGCCGCGAGCTGCTGCTGACCCCGGCCGTGCGCGCGCGTGCGCGTGAGCTCGCCGAGCGCTCTCCGGGCGTGCGCGGCATGCTGGAGAAGCTAGCGGAGGGCATCCCGGCCGAGGGCATGGAATCGCTCACCCCGGCCCTCGTCGACGAGCTCGTCACGCTCGTGGACTATCTGCCCAGCGGCACCGCGGTGGCGCTGCTGGACCCGGAACGGGCCGTGACCCGATCGCTGACCCTCAGCGAGACCAACCGCGAGTTCCTCGAGGCGGCATGGAACGCGGCCACTGCGGGCGGCCAGGCGCCCCTGGACCTCGGCGCCGGTGACTTCCTGACGCTCGGCGACCTGCATGAGCGGGCGCGCGAGCACGGTGGCGTGTGGTGGACGTTCAGCGCCTTCGACGCGGGAACAGCGGATGCCGCCGCGGAGGGCCTCCTGTCCCCCGACGACGACGATGATGACGCCGAGGCCACCCGCATCCAGGGCCAGGCCGTGCCCTCGTTCCAGGGGAACATCGACGGGGCCACCGTGCACATCGCCGAGCTGCTGCGCGACGGGTACCGGGTCGTGGTCGCCGCCTCCGGCGTGGGGCTCGCCGACCGTGCACGCGACGTGCTGGCCGAGCGGGCGGTCGCCGCGCGCCGCGTCGACGAGGTGCGCGAGGCTCCCGAACCCGGGGTCGCGCACGTCGTGGTGGCCAGCCTCGAGCGCGGATTCGAGGCACCCGCTGCCAGACTCGCCGTGCTCACCGAGAACGAGTTCTACGGCCGGAGCGTCGGCGCGGACTCCCGTATGGTGCGCAAGCTCGCCTCGCGTCGCCGCAACGTCGTCGACCCGCTGCAGCTGAAGCCCGGCGACATCGTCGTGCACTCCACCCACGGCATCGGGCGATTCGTGGAGCTCACCCAGCGCGAGGTCTCCAGCGGCGGGCGCAATCCGGTCAAGAGCACCCGCGAGTATCTCGTGCTCGAGTACGCGCCGAGTAAGCGCGGGCACCCCGGTGACAAGCTGTTCGTGCCCACCGACCAGCTCGACCTGCTCTCGCGCTACGTCGGCGGGGATGCGCCGGCGCTGTCGAAGATGGGCGGCAGCGACTGGGCCCGTGCCAAGGGCAAGGCACGCAAGGCCGTGCGTGACATCGCCGTCGAGCTCGTGAAGCTGTACTCCGCGCGGATGGCGTCCAAGGGCCACGCGTTCGGTGCCGACACCCCCTGGCAGCGCGAGCTGGAAGAGGCGTTCCCGTTCGCGGAGACGCCGGATCAGCTGCAGACGATCGACGAGATCAAGGCCGACATGGAGAAGCCGATTCCGATGGACCGGCTGCTGTCCGGCGACGTCGGCTTCGGCAAGACCGAGGTGGCCGTGCGGGCGGCGTTCAAGGCGATCCAGGACGGCAAGCAGGTCGCGATGCTGGTACCTACGACGCTCCTGGTCAAACAGCACCTGGACACCTTCACCGAGCGGTTCGCCGGCTTCCCCGTGAAGGTGTGGCCGCTGTCGCGATTCCAGACCGACAGCGAGGCGCGGGCGACCCTGGCCGGCCTCGCCGACGGGACCATCGACATGGTCATCGGCACGCACCGCATCCTCACCGAGAAGGTGGCGTTCAAGGACCTCGGGCTGCTGATCGTCGACGAGGAGCAGCGCTTCGGGGTCGAGCACAAGGACGCGTTGAAGAAGCTCAAGGTCGGAGTGGACATCCTCGCGATGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCATCCGTGAGATGTCGACGCTGCAGACGCCGCCCGAGGACCGCCATCCGATCCTCACGTACGTCGGCCCCCGCAACGACAAGCAGGTCGCGGCCGCCATCCGGCGTGAGATCCTGCGCGAGGGCCAGGTGTTCTACGTGCAC
PROTEIN sequence
Length: 866
VTVPGIARALAQADAVREALTAASVDTDFSLVEGLNAPVLAALVERRRAAGHPAALLVITPTSRRAETVGPALGELLPGATVVHFPAWETLPHERLSPSAETVGRRLDALRRAREWSQAPDSGPLVITASVRGALQPLAAGLDEVAPIVLAVGSRGHDLSAVSAELVQRAYLRVDMVSRRGEFAVRGGILDVFPPTADHPLRIEFFGDEIDQIRAFSVTDQRSLPDETGRVQLLPSRELLLTPAVRARARELAERSPGVRGMLEKLAEGIPAEGMESLTPALVDELVTLVDYLPSGTAVALLDPERAVTRSLTLSETNREFLEAAWNAATAGGQAPLDLGAGDFLTLGDLHERAREHGGVWWTFSAFDAGTADAAAEGLLSPDDDDDDAEATRIQGQAVPSFQGNIDGATVHIAELLRDGYRVVVAASGVGLADRARDVLAERAVAARRVDEVREAPEPGVAHVVVASLERGFEAPAARLAVLTENEFYGRSVGADSRMVRKLASRRRNVVDPLQLKPGDIVVHSTHGIGRFVELTQREVSSGGRNPVKSTREYLVLEYAPSKRGHPGDKLFVPTDQLDLLSRYVGGDAPALSKMGGSDWARAKGKARKAVRDIAVELVKLYSARMASKGHAFGADTPWQRELEEAFPFAETPDQLQTIDEIKADMEKPIPMDRLLSGDVGFGKTEVAVRAAFKAIQDGKQVAMLVPTTLLVKQHLDTFTERFAGFPVKVWPLSRFQTDSEARATLAGLADGTIDMVIGTHRILTEKVAFKDLGLLIVDEEQRFGVEHKDALKKLKVGVDILAMSXXXXXXXXXXXXXGIREMSTLQTPPEDRHPILTYVGPRNDKQVAAAIRREILREGQVFYVH