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scnpilot_solids1_trim150_scaffold_210_curated_17

Organism: solids_Nitrosospira_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(14621..15625)

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase RluD; K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] similarity KEGG
DB: KEGG
  • Identity: 87.4
  • Coverage: 334.0
  • Bit_score: 587
  • Evalue 2.60e-165
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 334.0
  • Bit_score: 587
  • Evalue 1.10e-164
Pseudouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YA53_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 87.4
  • Coverage: 334.0
  • Bit_score: 587
  • Evalue 8.10e-165

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GTGAGGGAAATCATAGGGGAGGACAGCACGGGTCAGCGTATTGATAATTTTTTAATCAAACGCTTGAAAGACGTGCCCAAAAGCCACATCTACCAGATGTTGCGCAGCGGGCAGGTGCGGGTTAACAGCAAGCGAACTGCTCCGGATTACCATCTCCGGTCCGGGGATGTCGTTCGCATACCCCCGATGAGAATGGTGGAAAAATCGGCGCCGCCCCTGAAGAAATTGAGCAAGCCGGGTTTTATTGCATTCCAGGTTTTGTTCGAGGATGATGCGCTGATTGTCGTCAACAAGCCTCCCGGAGTTGCCGTGCATGGAGGAAGCGGCATAAGTTTCGGAGTGATAGAGCAATTGCGCGCCCAGCATCCTGGCTGGAGATTTCTGGAGCTCGTGCACAGGCTGGATAGGGAAACTTCCGGCGTACTGCTCCTTGCCAAGAACCGGCCGGCACTTGTAGAGTTGCATCGGCAACTTCGTGCTGGAGAGGTGGAAAAGCACTACCTGACCCTGGTCAAGGGACAGTGGCGTAATGCGCGTCAGAGTGTCAGGCTGTCGCTCAGAAAATATCTGACACCCGCCGGCGAGCGGCGTGTAGCGGTGGAAAAGGGGGCAGATGAAAAAAAAGGTGGAGATGAGAAAAAAGGCGGAATGAGTGCCCATACTATTTTCATCCTGCGGAAATCGTGGCAGAGCTTCAGCCTGCTGGAGGCTGAACTGAAGACCGGACGTACCCATCAGATTCGCGTGCACCTTGCTTATCTCGGGTTTCCTATAGCAGGAGATGACAAGTATGGTGATTTTGCCTTGAATAAGGATATTGCCCGGTGTGTTCCTGGTTTGGGGCGCATGTTTCTCCATGCCTGGGCGGTGGGATTCACGCATCCCGTCACGCATGAAAAACTTCGTCTCGAAGCACCGCTGCCCGACGATCTGCAAAAATTTCTGGATGCGATGGATAGCCACGATAAGCCATCGAGGCTTCCGGCGGAAAGGACATTCTCCTGA
PROTEIN sequence
Length: 335
VREIIGEDSTGQRIDNFLIKRLKDVPKSHIYQMLRSGQVRVNSKRTAPDYHLRSGDVVRIPPMRMVEKSAPPLKKLSKPGFIAFQVLFEDDALIVVNKPPGVAVHGGSGISFGVIEQLRAQHPGWRFLELVHRLDRETSGVLLLAKNRPALVELHRQLRAGEVEKHYLTLVKGQWRNARQSVRLSLRKYLTPAGERRVAVEKGADEKKGGDEKKGGMSAHTIFILRKSWQSFSLLEAELKTGRTHQIRVHLAYLGFPIAGDDKYGDFALNKDIARCVPGLGRMFLHAWAVGFTHPVTHEKLRLEAPLPDDLQKFLDAMDSHDKPSRLPAERTFS*