ggKbase home page

scnpilot_solids1_trim150_scaffold_359_curated_25

Organism: solids_Nitrosospira_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(32998..33876)

Top 3 Functional Annotations

Value Algorithm Source
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=TTCA_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 291.0
  • Bit_score: 573
  • Evalue 1.10e-160
C32 tRNA thiolase; K14058 tRNA 2-thiocytidine biosynthesis protein TtcA similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 291.0
  • Bit_score: 573
  • Evalue 3.30e-161
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000255|HAMAP-Rule:MF_01850}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 291.0
  • Bit_score: 573
  • Evalue 1.50e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGCTGTCCCGGAAGGAGCAGCATAACGTCAACAAACTGCACAAGCGGTTGAGGCGGCTTGTGGGCACGGCAATAGCTGATTTCAACATGATCGAGCCTGGAGATCGGGTAATGGTGTGTCTCTCGGGCGGAAAGGACAGTTATGTCCTGCTCGATATCCTTCGCAGCCTTCAGGCGCACGCAGCCATACAATTCGAGCTGATTGCGGTAAATCTGGACCAGAAGCAGCCGGGCTTCCCGGAACACGTGTTGCCGAACTATCTCACTTCCGTCGGCATGCCTTTCCGCATTGTCGAGCAGGATACCTATAGCGTGGTGAAGCGCCTGATACCGGAGGGGAAAACCACTTGCAGCCTTTGTTCACGCTTGCGCAGGGGGGTTCTGTATCGCGTGGCGGGCGAGCTGGGCGCAACGAAAATCGCGCTGGGCCACCATCGCGATGATATTCTCGAAACCCTGTTTCTCAACCTGTTTCATGGCGGCAAGCTGAAAACCATGCCGCCCAAGCTGGTAAGCGATGATGGCAGGCATATCGTCATCCGGCCGCTTGCCTATTGCAAGGAGAAGGACCTGGCCGCCTATGCGGAGATGGAAAATTTCCCGATCATCCCCTGCAATCTGTGCGGATCGCAGAAGAATATGCAGCGCCAGGCGGTCAAGGAAATGCTGCAGCAATGGGATAAAAAGTTTCCCGGCAGACTGGAAAACATGTTCAGTTCCTTGCAGAACATCCAGCCCTCGCATCTGCTCGATTCCTCGCTTTACGATTTTCATGGACTCAAAACCGGGAACGGGCCGGTTGTCGATGGCGACAGGGCATTCGACCCCGAGCCCTTTGAACCGGGCATGGAAGAACTCCTGAACCTGAACAAAGGGTGA
PROTEIN sequence
Length: 293
MLSRKEQHNVNKLHKRLRRLVGTAIADFNMIEPGDRVMVCLSGGKDSYVLLDILRSLQAHAAIQFELIAVNLDQKQPGFPEHVLPNYLTSVGMPFRIVEQDTYSVVKRLIPEGKTTCSLCSRLRRGVLYRVAGELGATKIALGHHRDDILETLFLNLFHGGKLKTMPPKLVSDDGRHIVIRPLAYCKEKDLAAYAEMENFPIIPCNLCGSQKNMQRQAVKEMLQQWDKKFPGRLENMFSSLQNIQPSHLLDSSLYDFHGLKTGNGPVVDGDRAFDPEPFEPGMEELLNLNKG*