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scnpilot_solids1_trim150_scaffold_54_curated_13

Organism: solids_Nitrosospira_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(11238..12251)

Top 3 Functional Annotations

Value Algorithm Source
dihydrouridine synthase TIM-barrel protein nifR3; K05540 tRNA-dihydrouridine synthase B [EC:1.-.-.-] similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 337.0
  • Bit_score: 661
  • Evalue 1.80e-187
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 337.0
  • Bit_score: 661
  • Evalue 8.20e-187
tRNA-dihydrouridine synthase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCT1_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 337.0
  • Bit_score: 661
  • Evalue 5.80e-187

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Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1014
ATGAAAATCGGTTCTCATATTCTCAAAAACAATCTTATCGTGGCGCCTATGGCGGGGGTGACAGATCGCCCGTTCAGGCAACTGTGCAAAAACATGGGCGCTGGAATGGCTGTGTCCGAAATGGTGTCGAGCAATTCGCTCCTCTGGGGTTCCGAGAAGACGCGCCGTCGCGCCAATCATGAAGGCGAGGTGGATCCGATCTCGGTGCAGATCGCCGGTGCCGACCCGACGATGATGGCGGAAGCTGCGCGCTACAATGTCGCGCAAGGAGCCCAGATCATCGACATCAATATGGGGTGCCCCGCCAAGAAGATTTGTAATGTCATGGCAGGCTCCGCATTGCTGCAGGATCCGCCGCTGGTGGGACGTATCCTGGATGCCGTCGTAGGTGCGGTGAGTGTGCCTGTCACCCTCAAGATTCGCACCGGGTGGGACACCCAGCACAAGAATGCGCTCTCCATTGCCCGCATCGCGGAGAATGCGGGCATCCAGGCGCTTGCCATCCATGGACGTACACGCGCCTGTGCTTATACCGGCCATGCCGAATACGATACCATTGCGGCAGTAAAGGCTGAGGTGCAGATTCCCGTTGTCGCCAATGGGGACATTACGACACCGGAAAAAGCAAAACACGTTCTTGACTATACGGGAGCGGATGCCGTCATGATCGGCCGCGCAGCCCAGGGCCGTCCCTGGATCTTTCGCGAGATCAGTCACTATCTCGCTACCGGCTCACACCTTCCGCTGCCGGAAGTGGCCGAGATTCACCGTGTACTCGTTGCACATTTGCACGATCTGTATAGCTTCTATGGCGAGTATTCGGGGGTGCGCATCGCCCGCAAGCATATTTCCTGGTACACCAAGGGACTGGTCGGATCTGCGGGTTTCCGTCATGCCATGAACCAGCTGCAGTCTACCGACCAGCAGCTGTCCGCGGTTAACGACTTTTTCAGCGAGCTTGCCGGCTACGGGCGGCGACTGACCTATGTCGAGGCTGAGGAGCTGGTGGCATGA
PROTEIN sequence
Length: 338
MKIGSHILKNNLIVAPMAGVTDRPFRQLCKNMGAGMAVSEMVSSNSLLWGSEKTRRRANHEGEVDPISVQIAGADPTMMAEAARYNVAQGAQIIDINMGCPAKKICNVMAGSALLQDPPLVGRILDAVVGAVSVPVTLKIRTGWDTQHKNALSIARIAENAGIQALAIHGRTRACAYTGHAEYDTIAAVKAEVQIPVVANGDITTPEKAKHVLDYTGADAVMIGRAAQGRPWIFREISHYLATGSHLPLPEVAEIHRVLVAHLHDLYSFYGEYSGVRIARKHISWYTKGLVGSAGFRHAMNQLQSTDQQLSAVNDFFSELAGYGRRLTYVEAEELVA*