ggKbase home page

scnpilot_solids1_trim150_scaffold_149_curated_20

Organism: solids_Nitrosospira_1

near complete RP 51 / 55 BSCG 51 / 51 ASCG 14 / 38
Location: comp(18824..19390)

Top 3 Functional Annotations

Value Algorithm Source
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 183.0
  • Bit_score: 297
  • Evalue 3.90e-78
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 183.0
  • Bit_score: 297
  • Evalue 1.70e-77
2',5' RNA ligase n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2Y753_NITMU similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 183.0
  • Bit_score: 297
  • Evalue 1.20e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosospira multiformis → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGATGGCGACAAGATGTCTGAAGAAGCCAGCCAAAAGGCAGTACGCCTGTTTTTTGCGATATGGCCCGACATGGAAACCCGCATGCAACTGGGACGGCTGACCGGACGGTTGGCATCGGTTTGCGAGGGGCGGAAAACAAAAACGGAGAACATTCACCTCACGTTGGTTTTTGTAGGAGAGGTGAATGCAAGCCAAATGGCTGCTTTATACAGGACAGCGGATGAAATCAAGGACTCCGGGATGCGTGCTTTCCATCTTCCTATTGAAAGAATCCGTATGTGGAAACGCAAGAATATCGTTTATGCGGAAATCAGCGAAATTCCCCAGCCGCTCATCGATCTGGTCGAAGCTTTGCAGAGCAGACTTTCATCGGCAGGATTTTCATTGGAGGAGCGGTCTTACAAGCCCCATATCACCCTCATGAGGAATGCATCCTGTAAAACGCTGCCTGAACTGGCAGAACCGATGGTGTGGCGGGTGCGGGAGTGGGTATTGGTTAAATCGGACCGGACCAGCGGCGGTTCGGTTTATACACCGATCGACCGCTGGTCTCTGGAAGGATAA
PROTEIN sequence
Length: 189
MDGDKMSEEASQKAVRLFFAIWPDMETRMQLGRLTGRLASVCEGRKTKTENIHLTLVFVGEVNASQMAALYRTADEIKDSGMRAFHLPIERIRMWKRKNIVYAEISEIPQPLIDLVEALQSRLSSAGFSLEERSYKPHITLMRNASCKTLPELAEPMVWRVREWVLVKSDRTSGGSVYTPIDRWSLEG*