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scnpilot_solids1_trim150_scaffold_670_curated

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_670_curated_31
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31343..31600
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR91_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89732.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_670_curated_32
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31722..33215
DNA (1494bp) protein (498aa)
Mg chelatase subunit ChlI n=1 Tax=Rhodanobacter denitrificans RepID=I4WJW5_9GAMM
Mg chelatase-related protein
Mg chelatase-related protein {ECO:0000313|EMBL:AGG90666.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_670_curated_33
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33286..35163
DNA (1878bp) protein (626aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Rhodanobacter denitrificans RepID=I4WJW6_9GAMM
NhaP-type Na+(K+)/H+ antiporter
NhaP-type Na+(K+)/H+ antiporter {ECO:0000313|EMBL:AGG90665.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_670_curated_34
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35176..35769)
DNA (594bp) protein (198aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Rhodanobacter denitrificans RepID=M4NKP4_9GAMM
1-acyl-sn-glycerol-3-phosphate acyltransferase
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:AGG90657.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_670_curated_35
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35766..36188)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF38_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL98079.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
protein chain release factor B
scnpilot_solids1_trim150_scaffold_670_curated_36
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36259..37905)
DNA (1647bp) protein (549aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
2-octaprenylphenol hydroxylase (EC:1.14.13.-)
Putative ubiquinone biosynthesis protein UbiB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VR82_9GAMM
scnpilot_solids1_trim150_scaffold_670_curated_37
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37902..38549)
DNA (648bp) protein (216aa)
Sterol-binding domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W781_9GAMM
Sterol-binding domain-containing protein {ECO:0000313|EMBL:EIL95322.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_670_curated_38
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38546..39022)
DNA (477bp) protein (159aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WF34_9GAMM
putative rRNA methylase SpoU family
scnpilot_solids1_trim150_scaffold_670_curated_39
unknown

Not on your lists

comp(39063..39275)
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_670_curated_40
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39461..40786)
DNA (1326bp) protein (442aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
16S rRNA m(5)C-967 methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase RsmB n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VLP3_9GAMM
scnpilot_solids1_trim150_scaffold_670_curated_41
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40783..41739)
DNA (957bp) protein (319aa)
Methionyl-tRNA formyltransferase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGN1_9GAMM
methionyl-tRNA formyltransferase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_670_curated_42
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41736..42245)
DNA (510bp) protein (170aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXT6_9GAMM
scnpilot_solids1_trim150_scaffold_670_curated_43
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42438..43577
DNA (1140bp) protein (380aa)
LysM domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM9_9GAMM
LysM domain-containing protein {ECO:0000313|EMBL:EIL98620.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
LysM domain-containing protein
scnpilot_solids1_trim150_scaffold_670_curated_44
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43667..44881
DNA (1215bp) protein (405aa)
DNA protecting protein DprA n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM8_9GAMM
DNA protecting protein DprA {ECO:0000313|EMBL:EIL98619.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA protecting protein DprA
scnpilot_solids1_trim150_scaffold_670_curated_45
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45013..47574
DNA (2562bp) protein (854aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
DNA topoisomerase 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NIH6_9GAMM
DNA topoisomerase I, bacterial
scnpilot_solids1_trim150_scaffold_670_curated_46
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47575..48147
DNA (573bp) protein (191aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012127}; Short=TC-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01852};; EC=2.7.7.87 {ECO:0000256|HAMAP-Rule:MF_01852, ECO:0000256|SAAS:SAAS00012122};; L-threonylcarbamoyladenylate synthase {ECO:0000256|HAMAP-Rule:MF_01852}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaC {ECO:0000256|HAMAP-Rule:MF_01852}; TaxID=1163409 sp
Threonylcarbamoyl-AMP synthase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK61_9GAMM
putative translation factor (SUA5)
scnpilot_solids1_trim150_scaffold_670_curated_47
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

48147..49517
DNA (1371bp) protein (457aa)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Rhodanobacter denitrificans RepID=M4NM61_9GAMM
acyl-CoA synthetase/AMP-acid ligase
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_670_curated_48
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49602..50894
DNA (1293bp) protein (431aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Phosphoribosylamine--glycine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WGM4_9GAMM
phosphoribosylamine--glycine ligase
scnpilot_solids1_trim150_scaffold_670_curated_49
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51072..51959
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQP7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL89538.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_670_curated_50
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(52139..52306)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC4_9GAMM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
ribosomal protein L33
scnpilot_solids1_trim150_scaffold_670_curated_51
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(52316..52552)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC3_9GAMM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
LSU ribosomal protein L28P
scnpilot_solids1_trim150_scaffold_670_curated_52
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52881..53387
DNA (507bp) protein (169aa)
Protein-export protein SecB n=1 Tax=Rhodanobacter denitrificans RepID=I4WJN2_9GAMM
protein translocase subunit secB
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_670_curated_53
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

53396..54421
DNA (1026bp) protein (342aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRC1_9GAMM
scnpilot_solids1_trim150_scaffold_670_curated_54
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54608..57571
DNA (2964bp) protein (988aa)
DNA/RNA helicase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCN9_9GAMM
DNA/RNA helicase {ECO:0000313|EMBL:EIL97230.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
DNA/RNA helicase, superfamily II, SNF2 family
scnpilot_solids1_trim150_scaffold_670_curated_55
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57664..58683)
DNA (1020bp) protein (340aa)
Glucokinase {ECO:0000313|EMBL:EIL89755.1}; EC=2.7.1.2 {ECO:0000313|EMBL:EIL89755.1};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
Glucokinase n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VRB4_9GAMM
glucokinase
scnpilot_solids1_trim150_scaffold_670_curated_56
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58836..59828
DNA (993bp) protein (331aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP5_9GAMM
delta-aminolevulinic acid dehydratase
scnpilot_solids1_trim150_scaffold_670_curated_57
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59959..61329)
DNA (1371bp) protein (457aa)
Glutamate--cysteine ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP8_9GAMM
glutamate--cysteine ligase, plant type
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
scnpilot_solids1_trim150_scaffold_670_curated_58
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61495..62082)
DNA (588bp) protein (196aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
Transcription termination factor Rho n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCP9_9GAMM
transcription termination factor Rho
Displaying items 31-58 of 58 in total

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