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scnpilot_solids1_trim150_scaffold_1271_curated_9

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(7581..9269)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase B {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019096}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01587, ECO:0000256|SAAS:SAAS00019091};; Polydeoxyribonucleotide synthase [NAD(+)] B {ECO:0000256|HAMAP-Rule:MF_01587}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 557.0
  • Bit_score: 770
  • Evalue 1.20e-219
DNA ligase B n=1 Tax=Rhodanobacter denitrificans RepID=I4WX80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 546.0
  • Bit_score: 776
  • Evalue 1.60e-221
NAD-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 68.3
  • Coverage: 546.0
  • Bit_score: 769
  • Evalue 1.00e-219

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1689
ATGTGGCGTCGATGGCTGGCTTGGGTGGGCATTGCCGGACTGTGCATCGGCCCGGCATGCGCACAGGATTGCCCGCGCTGGTCGCCGGCGCAGGCACAACGGGAAATGACCGAGCTGGCGGCACGCGTCGATGGCTGGAACCACGCCTATCGCGTCGACGGCCAATCGCCGGTGGATGATACGGTCTACGACCAGGCCCGGCGCCAGCTTGGCACCTGGCGCAGCTGTTTTCCAGCGCAGGCGCCGGACATGCCGTCCCCGCTCGCCGATGCGGGTGGAGCGACGCGGGCGCCGGTCGTGCAGACCGGCCTTTCGAAGCTGCCCGATGCTGCCGCCCTCGATGCCTGGCTGCGTGCCCGCGCCGCCGGTGATTTGTGGGTACAGCCCAAGGTCGACGGCGTGGCGGTGACGCTGCTCTATGTGGATGGCCAATTGCGCCAGGCGACCAGTCGCGGCGATGGTGTCCACGGCAGCGATTGGACGGCCAAAGCCATGCGCATCGAGGCCATACCCCGGCGCCTGCCGCACGCACCGCGGCGCGTGGTCTTGCAAGGCGAGTTGTACTGGCGCGTGCCCGGGCATGTGCAGGCGCGGGATGGCGGCGCCAACGCACGGTCCGCCGTGGCCGGCGTCTTGGCGCGGACGACGCTGGATGCGGCTACCGCGAACCGCGTCGGCCTGTTCGTGTGGGATTGGCCCGATGGTCCTCCCGGCATGGTGCAGCGCCTGGCCGGCTTGCGTGCCATGGGACTGGAAGACAGCTTGGCCTGGACCCGGCGCGTGACCACGCTGGTCGACGTCGAGCACTGGCGTGAACAGTGGTACCGCCAGGCGCTACCGTTTGCCGCCGACGGCACGGTCGTGCGCCAGGGCCAGCGCCCGCCGGCGTCCACCTGGCAGGCGCGTCCGCCGACATGGGCGGTGGCCTGGAAGTATCCGGCCGCGCAAGCGCTGGCCGAGGTGCGCGCGGTGGCATTCAACGTCGGCCGTAGCGGTCGCATCACGCCCGTGCTGGAGTTGGCCCCGGTGCAGTTGGGGGACCATCGCGTGCAGCGCGTCAGCGTTGGTTCGCTGCAGCGCTGGCGGCAATTGGACATTCGTCCTGGCGACCATGTGGAGGTCGCGCTTGCCGGCCTGACCATTCCGCGCCTGCAAGCCGTCGCCTGGCATGCGCGCGAGCGCGTGGCGCTGGCGGTGCCCGATCCGCGTGCGCATGACGCGTGGAGTTGTTGGCAGAACACGCGGGGTTGCGAACAGCAGTTCCTCGCGAGGCTGCTGTGGCTGGGCGGCGCGCAGGGTTTGCAGCTCGATGGCGTGGGCCGGGACGCCTGGCAGGCCCTGATCGACGGTGGCGTGTTGCATGACCTGCTGGACTGGATCGAGTTGACGCCGGCGCAACTCGCGGCTGTCCCGCAGCTTACGCCGTGGCGTGCGCGGGCCTTGAATCACGCATTTGCCAGCGCGTATCGCAAGCCGTTCGCACAGTGGCTGCGCGCGCTGGGCGGGCCCGCGGTGAGCTTGCGTGACGGGGAAGACTGGCGCGTGTTAAGCGCCCGCGACACGGAGGCTTGGAAGCGCGTGGCAGGCATCGACGCTGCCAAGGCCCGCCGGTTGGCGCAGTTCTTCGCGCAGCCCACGGTGCGGGCACACGCCGCGCGCCTGCATGCTGCCGGTGTGCCGGGCTTTTAG
PROTEIN sequence
Length: 563
MWRRWLAWVGIAGLCIGPACAQDCPRWSPAQAQREMTELAARVDGWNHAYRVDGQSPVDDTVYDQARRQLGTWRSCFPAQAPDMPSPLADAGGATRAPVVQTGLSKLPDAAALDAWLRARAAGDLWVQPKVDGVAVTLLYVDGQLRQATSRGDGVHGSDWTAKAMRIEAIPRRLPHAPRRVVLQGELYWRVPGHVQARDGGANARSAVAGVLARTTLDAATANRVGLFVWDWPDGPPGMVQRLAGLRAMGLEDSLAWTRRVTTLVDVEHWREQWYRQALPFAADGTVVRQGQRPPASTWQARPPTWAVAWKYPAAQALAEVRAVAFNVGRSGRITPVLELAPVQLGDHRVQRVSVGSLQRWRQLDIRPGDHVEVALAGLTIPRLQAVAWHARERVALAVPDPRAHDAWSCWQNTRGCEQQFLARLLWLGGAQGLQLDGVGRDAWQALIDGGVLHDLLDWIELTPAQLAAVPQLTPWRARALNHAFASAYRKPFAQWLRALGGPAVSLRDGEDWRVLSARDTEAWKRVAGIDAAKARRLAQFFAQPTVRAHAARLHAAGVPGF*