ggKbase home page

scnpilot_solids1_trim150_scaffold_2016_curated_7

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 4962..6296

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbL n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP32_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 444.0
  • Bit_score: 765
  • Evalue 3.80e-218
Conjugal transfer protein TrbL {ECO:0000313|EMBL:EIM01224.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 444.0
  • Bit_score: 765
  • Evalue 5.30e-218
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL similarity KEGG
DB: KEGG
  • Identity: 65.4
  • Coverage: 448.0
  • Bit_score: 554
  • Evalue 3.20e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1335
ATGAACGACCTGTCCGTCATCGACCAGTTCCTGGCGATCTTCTCGCAGTACATCGATTCCGGTTTCGGGCTGCTGCATGGCGAAGTCGCGTATCTGAGCGCCACGCTGATCGTCATCGACATGACATTGGCGGGCCTGTTCTGGGCGATGGGCGGCGAGGACGTGCTGACCAAGCTCATCCGCAAGACGCTTTACATCGGTGCCTTCGCCTACATCATCGGCAACTTCAACACGCTGGCCGGCATCGTGTTCCGCTCGTTCACGGGCCTCGGGTTGCTCGCCGCCGGTTCGACGTTGAGCATCGGCAACTTCCTGCAACCTGGGCGACTCGCCGCGATCGGCGTCCAGGCTGGCCAGCCGATCCTGCAACAGATCGGCACGATGTCGCACGGGTTCACGGCCGTTTTCAGCAACCTCGACATGATTGTGGTGCTGCTGCTCGCGTGGATCGTGGTCGTCATCAGCTTCTTCATCCTGGCCGTACAGCTTTTCGTGACGCTGATCGAGTTCAAGCTGACCACGCTGGCCGGCTTCGTGCTGGTGCCGTTCGCGCTGTGGAACAAGACGGCGTTTCTTGCAGAGAAGGTGCTCGGCAACGTGGTGTCCTCGGGCGTCAAGGTGTTGGTGCTGGCCGTGATCGTCGGCATCGGCTCGACGATCTTCGGACAGTTCCAGACACCGACCGGCGCCGATCCGTCGCTGAACCATGCGCTCGCCGTCATGCTGGCCTCGCTCACGATGCTGGGCCTGGGCATCTTCGGGCCAGGCATTGCCACGGGCCTCGTGTCCGGCGCACCGCAGCTCGGTGCCGGGGCGGCGGCCGGTACAGCACTCGGTGCCGCGGGCCTTGCCGTTGCCGGCGGTGCTGCGGTCGCGACGGGCGGTGCTGCAGTCGCAGCCGGAACACGCCTGGCGGCACGCGGCGCCATAGGCGCCACGCGCGCAGCCGGTGGTGCGGCGTCGGCCTATCGCGCCGGCGCTGCCGCCTCGGGTGCGACCGGCGCACGGGCCTTCGGCGCGGGCATGGCCAACGTGGCGCGTAGCGGCGCGCAGGCGGCGGGTGAGCGAGTCGCTGCCGGCGCCCGTGCCGTGCGGAATCGTGTTGCATCGGCAGTCGGTGCTTCAAGCTCACCCGCCGGCAAAGCACCGGGCGCAGCGGCGGCGGCCGCCGCCGCATCACCGATAGCCAACGACAAAGCGCCTGACTGGGCGCAGCGGCTGCAACGCCACCAGCGCGTGGCACACGGCACCTCGACCGCTGCGCACGTGGTGCGCTCGGCCGATCACGGCGGCGGTGGCGCAACCCCCGAGCTGCGCGATTCCTCGAACGAGTAA
PROTEIN sequence
Length: 445
MNDLSVIDQFLAIFSQYIDSGFGLLHGEVAYLSATLIVIDMTLAGLFWAMGGEDVLTKLIRKTLYIGAFAYIIGNFNTLAGIVFRSFTGLGLLAAGSTLSIGNFLQPGRLAAIGVQAGQPILQQIGTMSHGFTAVFSNLDMIVVLLLAWIVVVISFFILAVQLFVTLIEFKLTTLAGFVLVPFALWNKTAFLAEKVLGNVVSSGVKVLVLAVIVGIGSTIFGQFQTPTGADPSLNHALAVMLASLTMLGLGIFGPGIATGLVSGAPQLGAGAAAGTALGAAGLAVAGGAAVATGGAAVAAGTRLAARGAIGATRAAGGAASAYRAGAAASGATGARAFGAGMANVARSGAQAAGERVAAGARAVRNRVASAVGASSSPAGKAPGAAAAAAAASPIANDKAPDWAQRLQRHQRVAHGTSTAAHVVRSADHGGGGATPELRDSSNE*