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scnpilot_solids1_trim150_scaffold_112_curated_172

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(202831..203187)

Top 3 Functional Annotations

Value Algorithm Source
Putative lipoprotein n=1 Tax=Pseudomonas fluorescens (strain Pf0-1) RepID=Q3KGL8_PSEPF similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 76.0
  • Bit_score: 66
  • Evalue 2.20e-08
lipoprotein similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 76.0
  • Bit_score: 66
  • Evalue 7.00e-09
Putative lipoprotein {ECO:0000313|EMBL:ABA73088.1}; Flags: Precursor;; TaxID=205922 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens (strain Pf0-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 76.0
  • Bit_score: 66
  • Evalue 3.10e-08

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 357
ATGAAACGTATCGGGATCCTTGCCACGGCGACTGGACTGACGATATTGGTCGCGCTACCCGCGATCGCCTCTGCCCACACACGGGTGTTCGTCGGCGTCAACCTGGGCGGACTGTTCGACCCGGCGCCGATCGTGTACGCGCCGTCGTCCCCGGTGGTCTATACCACGCCGGCCTATTACCCGCCGACCCGTACGTACTATGAGCCGGCGCCTGCCTACTATGCACCGCGCATCTACTATGCACCGCGCGACTATCGCTATGACCGCCGCGGCTGGCGTGACCACGACGAATGGCGCGACCACGACCGCGGACGGCGCGGCCACGGCCGCCATTGGCGCGATGACGACGAGCAATAA
PROTEIN sequence
Length: 119
MKRIGILATATGLTILVALPAIASAHTRVFVGVNLGGLFDPAPIVYAPSSPVVYTTPAYYPPTRTYYEPAPAYYAPRIYYAPRDYRYDRRGWRDHDEWRDHDRGRRGHGRHWRDDDEQ*