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scnpilot_solids1_trim150_scaffold_486_curated_18

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(17173..18057)

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.3
  • Coverage: 272.0
  • Bit_score: 344
  • Evalue 1.50e-91
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 273.0
  • Bit_score: 331
  • Evalue 2.20e-88
shikimate 5-dehydrogenase n=1 Tax=Dyella japonica RepID=UPI0002DE9687 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 272.0
  • Bit_score: 339
  • Evalue 4.40e-90

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 885
GTGGAGGAATTGGAGAACATCGTGGCGTCAACCAGGTTTGCCGTGTTCGGCCATCCCATCGCGCACAGCCTGTCGCCGCGTATCCATCAGGCGTTTGCACGCCAGTTCGGCATGCAGCTGGAGTTCGATACCGTCGATGCGACGCCGGAAATCTTCGAGGCTGCGGTCGGGCAGTTTTTTGCCGACGGCGGTACCGGCGCCAATGTCACCGTGCCGCACAAGCACGCGGCCTTTGCCCTGGCTGCCGAACGCGATGTGAGTGCCGCGCGGGTCGGCGCCGCCAATGTGCTCAGTCGCCTGCCGGATGGCCGCCTGGCCGCCCACAACACCGATGGTGCCTGCCTGGTGCGGGATTTGCGCGAGCGCCACCGACAGGTGCTGGAGGGCAGCACGGTGCTGCTGCTCGGCGCCGGCGGCGCGGCCTGGGGCGTGGCGTTCAGCCTGCTCGATGCCGGCGTGCGCGCGCTGACCATTGCCAACCGCACGGCGGCCACGGCCGAGCGGCTGGCCCACGCGCTGGGACATCCCGGGCGGGTGCAGGCCTCCCCGTTGGCACGGCTCCCGGGAGCCGAACACTTCGACCTGATCATCAATGCCACCTCGGCAGGCCTGCTTGGCCACAGCCTGGATTTGCCCCTGGCGCTCGGTGGGCCAGAGGTGTTTTGCTATGACGTTTCGTATGCCAAGGCGGCGTTGCCGTTCCTGGCCTGGGCCCGTGCGGCCGGGGCGCGGCATGCCGTGGATGGCTTGAGCATGCTGGTGGAAACGGCGGCCGACTCGTTTGCCATCTGGCATGGGCTGCGCCCGGTCACCGAGCCGGTGTTCCAACAGCTGCGCGGACATCTGGCCGCGGCGGCGCACGAGCCAGCCGCGCTGGCGGTCTAG
PROTEIN sequence
Length: 295
VEELENIVASTRFAVFGHPIAHSLSPRIHQAFARQFGMQLEFDTVDATPEIFEAAVGQFFADGGTGANVTVPHKHAAFALAAERDVSAARVGAANVLSRLPDGRLAAHNTDGACLVRDLRERHRQVLEGSTVLLLGAGGAAWGVAFSLLDAGVRALTIANRTAATAERLAHALGHPGRVQASPLARLPGAEHFDLIINATSAGLLGHSLDLPLALGGPEVFCYDVSYAKAALPFLAWARAAGARHAVDGLSMLVETAADSFAIWHGLRPVTEPVFQQLRGHLAAAAHEPAALAV*