ggKbase home page

scnpilot_solids1_trim150_scaffold_536_curated_25

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(25551..26567)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein CpaB n=1 Tax=Pseudomonas geniculata RepID=UPI00029B42A1 similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 348.0
  • Bit_score: 272
  • Evalue 7.70e-70
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EZP46859.1}; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. RIT309.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 347.0
  • Bit_score: 274
  • Evalue 1.70e-70
Flp pilus assembly protein CpaB; K02279 pilus assembly protein CpaB similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 348.0
  • Bit_score: 268
  • Evalue 2.70e-69

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stenotrophomonas sp. RIT309 → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGCAAAAAGTTACCCGCGCCGCCGCTTTGTTGCTGGTTGCGCTGGCCGTGGTCCTCGCCATCGTGGCGTTCAACCTGAGCCGGCGCGCCGTGCAGTCAGCCAGCGGACCGACGGCGACCAACCCGGTCACCACCGACAGCCAGGCCGCGCCAAACGCCCTGCAACCTGCCGTGGTGGCCAGCAGCGCACTGCCGGCCGGCCAGGCCATTACGCGCAGCGCGCTACGCGTGGCCAAGGTGGCGCACCCGGTGGCCGGCGGCTACAGCGCGATCGATGCGGTGCTGGGAGACACGCCGCTGGTGGATATCCCGGCCGGCGTGCCGATCACCAGTCGCTTGCTCGCGCACGGTCTGGCCATGCAGCTCAAGCCCGGCGAACGCGCGCTGGCGGTACCTGTGGATGAGCTGGCTGGCGCCGGCAACCGCATCGTGCCAGGGGATTACGTGGATGTGTTCTTGAACCTCAAGGCACCGCCCACCTATACCAACGGCAAACCGGAGCCCAGCCAAACGCGCCTGTTGTTGTCGCGCCTGCGCGTGCTGGCCTATGGGAGCGAGGACTTGCCCGTCGTGCCGCCGCCGGTGGATGCCGCGGCCCCCTCCGCAGCGGCCAGCAGCAAGCGCGTCGCCCAGGCCGCGACGGCCAAGGCCCAGGACAAGCCGCCCGCACGCACCGCCGTCTTGGCCGTACCGCTCGGCCAGGTGGATCGCCTGTTGCTGGGCGCGCAGGACGGCAAGCTGGCGCTGGCTCTGCGCCACCCCGCCGACGAGGGCAAGCCGGATCCCCAGCTGTTCCCGCAGTTCCGCTCCGCACTCGCACCGCTGGCCCAGCTCACGCCCGCACAGCGCCAGCAGCTCGGCACGCCCGAGGAACGCGCCTTCGCCGGCATCGACGGGCGCGCTCTGGCCGCGCGTCCCGATGCCCTCGCCAAACCCGCGACGGCCCAATCCGCGCAGCACACCCGCACCACGCACCGCGTGGAAATCATCCGTGGCACCAAGGTCGATTCCCCATGA
PROTEIN sequence
Length: 339
MQKVTRAAALLLVALAVVLAIVAFNLSRRAVQSASGPTATNPVTTDSQAAPNALQPAVVASSALPAGQAITRSALRVAKVAHPVAGGYSAIDAVLGDTPLVDIPAGVPITSRLLAHGLAMQLKPGERALAVPVDELAGAGNRIVPGDYVDVFLNLKAPPTYTNGKPEPSQTRLLLSRLRVLAYGSEDLPVVPPPVDAAAPSAAASSKRVAQAATAKAQDKPPARTAVLAVPLGQVDRLLLGAQDGKLALALRHPADEGKPDPQLFPQFRSALAPLAQLTPAQRQQLGTPEERAFAGIDGRALAARPDALAKPATAQSAQHTRTTHRVEIIRGTKVDSP*