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scnpilot_solids1_trim150_scaffold_246_curated_3

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(4432..5055)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 207.0
  • Bit_score: 369
  • Evalue 4.00e-99
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92) similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 207.0
  • Bit_score: 361
  • Evalue 1.40e-97
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Dyella ginsengisoli RepID=UPI0003488A77 similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 207.0
  • Bit_score: 370
  • Evalue 1.30e-99

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGGATCCGATCCGTAACCTCAATCTGGTGCCCATGGTCGTCGAGCAGACTGCCCGCGGCGAGCGCTCCTATGACATCTACTCACGGCTGCTGAAGGAGCGCGTGGTGTTCCTGGTCGGCGAGGTCAACGACAGCGTGGCCAACCTGATCGTGGCCCAGCTGCTGTTCCTGGAATCCGAGAACCCGGACAAGGACATCCAGTTCTATATCAACAGCCCGGGTGGCGCGGTGACCGCGGGGCTGGCCATCTACGACACCATGCAGTTCGTCAAGCCGGACGTGAGCACCATGTGCATCGGCCAGGCGTGCAGCGCCGCTTCGCTGCTGTTGATGGCTGGCGCCAAGGGCAAGCGCTACTCGCTGCCCAATTCGCGCATCATGATCCATCAGCCTTCCGGCGGTGCGCAGGGCCAGGCCACCGACATCGAGATCCAGGCGCGGGAGATCCTCTACATCCGCAAGCGCCTGAACCAGATCTACGTCGACCATTCCGGCCAGCCGTTGGAAAAGATCGAGCGCGACATGGAGCGCGACCGCTTCATGAACGCCACGGAAGCCAAGGCCTATGGCCTGATCGACGAGGTGCTGGAGCGCCGGCCAGTGGACACCGTCAAGTCGGCGTGA
PROTEIN sequence
Length: 208
MDPIRNLNLVPMVVEQTARGERSYDIYSRLLKERVVFLVGEVNDSVANLIVAQLLFLESENPDKDIQFYINSPGGAVTAGLAIYDTMQFVKPDVSTMCIGQACSAASLLLMAGAKGKRYSLPNSRIMIHQPSGGAQGQATDIEIQAREILYIRKRLNQIYVDHSGQPLEKIERDMERDRFMNATEAKAYGLIDEVLERRPVDTVKSA*