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scnpilot_solids1_trim150_scaffold_246_curated_12

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(28200..29858)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036E4908 similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 557.0
  • Bit_score: 444
  • Evalue 1.40e-121
Type VI secretion-associated protein, BMA_A0400 family {ECO:0000313|EMBL:EIL93077.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 571.0
  • Bit_score: 416
  • Evalue 5.80e-113
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 576.0
  • Bit_score: 314
  • Evalue 9.00e-83

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1659
ATGCGGGATCCGACAGGGGTGGGGTTCTTCGGCAAGCTTCCTGGCGTTGGCGACTTCGTGCAACGCCGGCTGTCGCGGCAGTTTGTCGAGACCTGGGATCAGCATTTTGAATACGCCGTGGGCGCCAGCCGCAGTGCGCTGGGCACGGCCTGGCACGCTGCCTTCGAGCGTAGCCCCGTATGGCGCTTCCTGCTCGCACCCGACGTGTGTACCGGATCGGCCTGGACCGGCGTGATGGGGCCGTCCGCGGATCGGGTGGGACGTTGTTTCCCCATGGTGCTCGCAGCGCCGTTGCCGCCAGATCCGGCGGACGGGATGCAGGTGTTGCGCTACGCCGACGCTTGGTTTGACGCGTTGGAACGTGCCCAGCGCGCGGCCCAGGCGGATGCGTCGATGGGTATCGATGCATTCGACGCGCTCGTCGCCGCCTTGCCCGAGCCGCTCGCGGCATGCACCGCAGACCCGTTGGCCTGGATCGCGGGCATCGATGAGGGCGCTGACACAGCATGGCGCCTGGCGCTGCCCAACCGCGGCACCGACAGTGCCAGCCTGGCTGCCTGGTGGGCGCGTGCCCATGCGCAGAAGGACGGGCGTTGCCTGTGGTGGACCCTGGGCGCGGAACGCGTGCCGCCGGGCATCCTGCTGACGCAGGGTCTGCCTGCGCCGGACTTGTATACGGGCTTTCTCGACGCCAGCCAGGCGGCTGACGCCTGGCGTGAACCTGGTGCGCTCGCCGCCACGGCACAGCCGTCATATACCGCGCAGCCCACGGTGGCACCGCTGACTACTGAATCTGGCCGGCACATGTCGGCGGATGCCGAGACCACGGCCAGCCAGCCGCTGGTAAACCGCGCTGCGGTCATGCCCGCGCCTGCAGCGCCGGTCGTGCCTGCAGACGATCTGTCGGCCTTGCTCGGCGGGTCGCCCGAACCATTTGTGGCGGCCGCGCCCGCGCGCACCGGGAGGGGCGGGAGCCCGCTGGCGGACACCACCGCGATCGACGGCAATGCCGTGCTGTATCGATACGATTGCGAGCTGACCCTGGTGGCCGCGGACGAGGGCGAGTTCGACGCGAACCGGCGCGCGGCGGCAGCGGCACGCAGCATTGCCAACGACATGGAGACCGAGGAATTCGGCGCCGGCTTGCAGGTGTTGCGCGACCGGCTGCTGGCGACCCACTGGCAGCTACGCCAGGCCGGCGCCGGGCAGATCGTCCCGGTGGCCGAGGATGGTGCGATCGCCGCCGTGCGCGTGCTCGGCAAGCGGGCAGCGCTGTTGCGCATCGGTGCGGCGGGCGCATGGCATTGGCGGCATCACCAATTACGCCCGCTGTTTGCTGCCGCCGAGACGGCCGCTGCAGGCGCGGGTGCCGGCGGGGATGACCTGGACGACCTGTTGTTTGCCTCGGCTGCCGCAACCGTGCCAGGCCTCGGTGCCGCGGTGCAGCCGCAGTGCGACGAAGTGGTGTGCGCAGTCGAGCCGGGCGATCGCCTGTTGTTGGCCGCGACGCGCCGCCTGGTCGAGTTGCCCGCCAGCGCACTTGCGACGGCGCTGGCGGCTGGATCGTGCGGTGACGCCCGCGCGCAGATTGCACGGGCCGCCGGGCTGGGCTCGGCGTCGGAGCAGTGGCCGCTCGCGGTCATCGAGGTGACTGCATGA
PROTEIN sequence
Length: 553
MRDPTGVGFFGKLPGVGDFVQRRLSRQFVETWDQHFEYAVGASRSALGTAWHAAFERSPVWRFLLAPDVCTGSAWTGVMGPSADRVGRCFPMVLAAPLPPDPADGMQVLRYADAWFDALERAQRAAQADASMGIDAFDALVAALPEPLAACTADPLAWIAGIDEGADTAWRLALPNRGTDSASLAAWWARAHAQKDGRCLWWTLGAERVPPGILLTQGLPAPDLYTGFLDASQAADAWREPGALAATAQPSYTAQPTVAPLTTESGRHMSADAETTASQPLVNRAAVMPAPAAPVVPADDLSALLGGSPEPFVAAAPARTGRGGSPLADTTAIDGNAVLYRYDCELTLVAADEGEFDANRRAAAAARSIANDMETEEFGAGLQVLRDRLLATHWQLRQAGAGQIVPVAEDGAIAAVRVLGKRAALLRIGAAGAWHWRHHQLRPLFAAAETAAAGAGAGGDDLDDLLFASAAATVPGLGAAVQPQCDEVVCAVEPGDRLLLAATRRLVELPASALATALAAGSCGDARAQIARAAGLGSASEQWPLAVIEVTA*