ggKbase home page

scnpilot_solids1_trim150_scaffold_246_curated_30

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(52815..53330)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345E3D0 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 172.0
  • Bit_score: 311
  • Evalue 4.40e-82
Uncharacterized protein {ECO:0000313|EMBL:EIL91734.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.6
  • Coverage: 171.0
  • Bit_score: 310
  • Evalue 1.80e-81
type VI secretion protein, VC_A0107 family; K11901 type VI secretion system protein ImpB similarity KEGG
DB: KEGG
  • Identity: 82.9
  • Coverage: 170.0
  • Bit_score: 282
  • Evalue 1.20e-73

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGGCTAAGCAAAGTAGTCAGAAATTCATAGCTCGTAATCGAGCTCCGCGCGTCCAGATCGAGTACGACGTCGAGGTCTACGGCGCCCAGAAGAAGGTCCAGGTGCCATTCGTGATGGGCGTGATGTCGGACCTGTCCGGCGCCAACAATGCCGAGCTGCCGTCGATCGAGGAACGCAAGGCGTTGGAGATCGACGTCGACAACTTCGACAGCCGCCTGCAGTCGATGAAGCCGCGGGTGAGCTTTGCCGTACCGAACACCCTGACCGGCGAAGGCAACCTCAACGTCGACGTCACGTTCGAGAGCATGGATGACTTCTCGCCGGCCGCGGTGGCGCGCAAGGTGGCGCCGATCGCCAAGCTGCTGGAGGCACGCACCCAGCTCGCCAACCTCGGCACTTATCTGGATGGCAAGGCGGGTGCGGAGAAATTGATTGCGCAGGCAATCAACGACCCGGCACTGCTGCAATCGCTGGCTTCGGCGCCGAAGCCCGACGCCGGCACGGATGGAGAGTAA
PROTEIN sequence
Length: 172
VAKQSSQKFIARNRAPRVQIEYDVEVYGAQKKVQVPFVMGVMSDLSGANNAELPSIEERKALEIDVDNFDSRLQSMKPRVSFAVPNTLTGEGNLNVDVTFESMDDFSPAAVARKVAPIAKLLEARTQLANLGTYLDGKAGAEKLIAQAINDPALLQSLASAPKPDAGTDGE*