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scnpilot_solids1_trim150_scaffold_246_curated_40

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(62797..63273)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 157.0
  • Bit_score: 233
  • Evalue 2.60e-58
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12) similarity KEGG
DB: KEGG
  • Identity: 72.0
  • Coverage: 157.0
  • Bit_score: 230
  • Evalue 4.90e-58
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Dyella japonica RepID=UPI000307FE9A similarity UNIREF
DB: UNIREF100
  • Identity: 72.8
  • Coverage: 158.0
  • Bit_score: 235
  • Evalue 4.90e-59

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Taxonomy

Dyella japonica → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGATGCGCATAGGCACCGGTTTCGATGTCCACCGCTTCGGCCCCGGCACGTTCGTGATGCTGGGTGGTGTGCGTATTGCGCATGGCGCGGGGCTGGTCGCGCACTCCGATGGCGACGTGGTCATCCATGCCCTGTGCGATGCCATTTTCGGCGCCCTGGCACTTGGCGACCTGGGCACACACTTCCCGCCGGACGAGGAGCGCTGGCGGCAGGCCGACAGCCGTATTTTCCTGCGCCAGGCCGGGACCTTGATGCGCGAGCATGGCTATACGCTCGGCAACGCCGACGTCACGGTCATGGCCCAGGCACCACGCATCGCCCCGCATGTGCTGCACATGCGCGAAGTCCTGGCGCTCGACCTCAGGGTGGCCATCGAGCGCATCAGCATCAAGGCCACCACGACCGAAGGCCTGGGCTTCCTCGGCCGCGGCGAGGGTATTGCCGCGCAGGCGAGTGTGCTGCTGGACGTGGCATGA
PROTEIN sequence
Length: 159
MMRIGTGFDVHRFGPGTFVMLGGVRIAHGAGLVAHSDGDVVIHALCDAIFGALALGDLGTHFPPDEERWRQADSRIFLRQAGTLMREHGYTLGNADVTVMAQAPRIAPHVLHMREVLALDLRVAIERISIKATTTEGLGFLGRGEGIAAQASVLLDVA*