ggKbase home page

scnpilot_solids1_trim150_scaffold_246_curated_62

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(87435..88961)

Top 3 Functional Annotations

Value Algorithm Source
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 508.0
  • Bit_score: 889
  • Evalue 2.80e-255
Lysine--tRNA ligase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WIK9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 508.0
  • Bit_score: 889
  • Evalue 2.00e-255
lysyl-tRNA synthetase (class II) similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 513.0
  • Bit_score: 868
  • Evalue 1.10e-249

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1527
ATGAGCGAAGCTACCGACACCCTGCCTGCCGCCGATGAGAACAAGCTGATCGCCGAGCGCCGCGAGAAACTCGCGGTGTTGCGCAGGCAGGGCATTGCCTTCCCCAACGATTTTAAGGTGGACAGCTTCGTCGGCGACCTGCAGGACGAGTATGCCGACAAGGACAAGTACACCGCCGAGGTCGTCGAGGCAGCGCAGCGCCGGGTGAAGGTGGCCGGCCGCATGATGCTGAAGCGCGTGCAGGGCAAGGTCAGTTTCGCGCAGCTCCAGGACATGACCGGCCGCATCCAGCTGTTCATCCATCAGGGCACCGTGGGCGAGGCGGCTTACGAGGCGTTCAAGGGCTGGGACGTGGGCGACATCGTCGGTGCCGAGGGCACGCTGATGCGCACGCGCACCGGCGAGCTCACCGTGCGTGTCGACGCGCTGCGCCTGCTGACCAAGAGCCTGCGCCCGCTGCCGGACAAATTCCACGGCCTTGCCGACGTCGAGCAGCGCTACCGCCAGCGCTACATCGACCTCATCGTGACCGAGCCGGCGCGGCGCACGTTTGCCCTGCGTTCGCGGATCATCGGCTTCATCCGCCAGTGGCTGGAAGCACCGGCGCGGCGCTTCATGGAAGTCGAGACGCCGATGATGCACATGATCCCCGGCGGGGCGACGGCGCGGCCCTTCGTCACCCACCACAACGCGCTGGACCTCGACCTGTACCTGCGCGTGGCACCAGAGCTGTACCTGAAGCGCCTCGTGGTCGGTGGCTTCGACCGCGTCTACGAGATCAACCGCAACTTCCGCAACGAGGGCGTGTCCACCCGGCACAATCCCGAGTTCACCATGCTGGAGCTGTACCAGGCCTACGCCACCTATCACGAGATCATGGACCTCACCGAGGCGATGGTCCGCGATACCGCCAGCAAGGTCATGCAAACCACCGGGTTTGGCACGCCCGAGGCGCCGATCGACCTCGGGCCACCATTCCGGCGCTGGCGCATGGAAGATGCCGTACTCGAGCTCAACCCGGAAATCTCCCGCGATCAGCTGCGTGACCGCGAGGCCATGGCGGCGCATGCCCGGCGCCTTGGCGTGGCGCAGGTCAAGCCGGGCTACGGCTGGGGCAAGCTGCTGCTGGAAATTTTCGAGAAGACCGTCGAGCCCACCCTGGTGCAGCCCACCTTCATCATCGACCACCCGGTCGAGATTTCGCCGCTGGCGCGCGAGAGCGACAGCAACAGGGGTTATACCGACCGTTTCGAGCTCTTCATCGGCGGCCAGGAAATCGCGAACGGCTTTTCCGAGTTGAACGACCCGGAAGACCAGGCCGCGCGTTTCCGCGCCCAGGTCGAGGCGATGAACTCGGGCGACGACGAGGCCATGCACTTCGATGCCGACTACATCCGCGCGCTGGAAGTGGGCCTGCCGCCGACCGGCGGGCTCGGCGTCGGCATCGACCGGCTGGTGATGCTGCTGACCGGCTCCAGCTCGATCCGCGACGTGCTGCTGTTTCCCTACATGCGGCCGGAGGCATGA
PROTEIN sequence
Length: 509
MSEATDTLPAADENKLIAERREKLAVLRRQGIAFPNDFKVDSFVGDLQDEYADKDKYTAEVVEAAQRRVKVAGRMMLKRVQGKVSFAQLQDMTGRIQLFIHQGTVGEAAYEAFKGWDVGDIVGAEGTLMRTRTGELTVRVDALRLLTKSLRPLPDKFHGLADVEQRYRQRYIDLIVTEPARRTFALRSRIIGFIRQWLEAPARRFMEVETPMMHMIPGGATARPFVTHHNALDLDLYLRVAPELYLKRLVVGGFDRVYEINRNFRNEGVSTRHNPEFTMLELYQAYATYHEIMDLTEAMVRDTASKVMQTTGFGTPEAPIDLGPPFRRWRMEDAVLELNPEISRDQLRDREAMAAHARRLGVAQVKPGYGWGKLLLEIFEKTVEPTLVQPTFIIDHPVEISPLARESDSNRGYTDRFELFIGGQEIANGFSELNDPEDQAARFRAQVEAMNSGDDEAMHFDADYIRALEVGLPPTGGLGVGIDRLVMLLTGSSSIRDVLLFPYMRPEA*