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scnpilot_solids1_trim150_scaffold_132_curated_66

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(78891..81734)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WG70_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 62.9
  • Coverage: 862.0
  • Bit_score: 1094
  • Evalue 0.0
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EIL98461.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.9
  • Coverage: 862.0
  • Bit_score: 1094
  • Evalue 0.0
Lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 861.0
  • Bit_score: 839
  • Evalue 8.10e-241

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2844
GTGAAGATCGCCGCCGCCATTGCGTCCGCGCGGTCGGCTATCGAGCGGCACGGCGGCGGCTGGCGTGGTGCGTATGCGGTGGCCAGGCGCAGCGCGCGCATCCTCCGCGCGCTGGGTTGGCAGGGCCTGGCGCAGCGCATCCGCGCGGCCAACGCGTCCCCTGCCCCAGCCATGCGCCACGCGCAGGCCGCCGTTCTTCCGCCGGCCTGCCCGCTCGACCAGGTGCAGCTGCGCGTCGGCATCATGCTGCACGTGTTCTACCTCGACCTGCTGGACGAGCTGGCGCGCGATCTCGCCCTCATGCCGGTGCCGTACGTGTTGATGATCTCGGTCGGCGACGAAGCGACACGGGCTGCCGCGATGGCGCGCTGCCGTGACCTGCCGCGGCTGCAGGCGCTTGAGGTGCGCATCGTGCCCAACCGCGGGCGCGACCTGGCGCCGCTGCTACTGACCTTCCGTCGCGAGATCCTGGCGCTCGACGTCGTCTGCCACCTGCACACCAAGAAGTCGCTGTACTCCGGCCAGGAGCAGGATCGCTGGCGGCGCTACCTGGTCGAGCGCCTGCTCGGCAGTGGCGGGCGCATCGCCTGGATCCTCGGCATGTTCCAGGCCATGCCGCAACTGGGCATGGTCTACCCAGAAAGCTTCACCGCGGTGCCGTGGTGGGCACACACTTGGCTGAGCAACGTGGCCGACGCGCGCGAGCTTGGCGCGCGGCTCGGCATCGCCGTGGACCCGGCGGCGTATCTGGATTATCCGGCCGGCTCGATGTTCTGGGCGCGCACCGCGGCCCTGCGTCCGCTGTACGAACTCGAGCTGCCGCTCGAGGCCTTCCCGCCGGAACAAGGCCAGACCGACGGCACCACCCAGCACGCGCTGGAGCGCCTGCTGGGTCTGGTCGTGCCACGACAAGGCATGCTGCTCGGCATCCTGCCGGCGGACGGCACGCAGTCCTTGCACAGCGAAGGCGAGCGCAACTGGCACGCCTACTTCAGCGCCCCGCTGGCGCACAAGATCGGCCTGGCCGCGCTCGACGCCGAGCTGGTCTCGTTCGACGTCTTCGACACCCTGGTGTGGCGGCCGTTCCTGGAGCCGGCAGGTGCCCGGGCCTACCTGGGCTGGCTGGTGGAGCGGCGCCATGGCCTGGCCGGTTTCGCCGCGCTGCGCGCGCGCGCCGAACACGCGCTGTATTTGCGGCGAGGCTGCGACGCCACGCTGGCCGACATCTATACGGAGCTGGCGCGCCGGCCGGAACTGCGCGGCATGCCCATGGCCGCTTTGCAGGCGTTGGAACTGGACACTGAGCAACGTCTCCTCCGGTCCCGGCCCGCCGTGGTCGGCGCCGCGCAGGCACTGGCCCATGACGGCAAGCGCGTGATCGCCGTCTCCGACATGTATCTCGCGGTCGACGACCTGCGGCGCGTGCTGCCTTCGGCGACCAGTGAGCCGATCCAGGCGATCCATGTCTCCTGCGCCAACGGCTGGCGCAAGGATGGCGGCGAAGTCTGGCGCCGGCTACCCGAGCTGGAAGGCGTGCGTCCGCAGCGCTGGCTGCACGTCGGCGACAACGAACATGCCGACGTGCAGTTGCCGCAAGCCATGGGCTACATCCATCCTGTCCACGCCCTGCGCTCCAGCGCGCTGCTCGACCTCGTCCCCGCCTTGCGCGGCCTGCGCCCCGATACGACGCAACGCGAACGCTGGCAAGACCAGTTGTGGCTGGGCCTGCTGGCCAACCACTGCAACGCGCTGGCCGACGCGCACCCCGAGGCGTTTGGCGCGCAACTGAAGCTGGAAGCGCCGGAGACGCTGGGCTACCTGGTGCTCGGCCCGCTGCTGCTCGACTATGCGACCTGGCTGGCGCGCCTCGCCGGCGAACGTGGGGTGCGCCGCATCCTGTTCCTGAGTCGCGAAGGCCATCTGCTGCTGCAGGTGTTCCAGCGCATGCAGCACGCCGTGCCCGGACTTGCCGGCATCCACGCGAATTATTTCCTGGCGTCGCGGCGCGCCGTACATGCCGCCGCGCTGCGCAGCATCGAGGATCTGCATGGGGTGTTTGCCGCGCCGTACACCGGACCGCTGGACGAGCTGATCCGGGCCCGGCTGGGGGCACCCATGGCCACGGCCCTGGCGGGCCAGCTGACGCGCACCACCCTCGACAAGGAGGTGTTCCTGCCGGAAATGCGCACGCAGCTGGTCGAGCTGCTGCGCCCGTGTGCAGCCGCCATTCTTGAGGTCGCCCGGGCCGAGCGGGAAACCTACCTGGAATACTGCTCAAATGCCGGTGTGGACACGGCGACCATGGTGGCCGACATCGGCTACGCCGCCAGCATCCAGCAGGGCCTCATGCGGCTCACCGGCCAACCGCTCGGCGGCGCCTACCTGGCGCTGAAGGCCGCCGCGGACCAGGTCACGACGCAGCAAGGCTGGGCTTGCGCCCGCTTCCATAATGCGCGCGATGTCGAGGCCGGTGAAGACAGCCCGGTGATGCGCCACCACCTGCTGCTGGAGGCCATGCTCACCGCGCCACAAGGCCAGTTCTCGCACTTCGCGCGCAAGGCCGGCGCGCCAGTCCCGGTATATGCCACGAACGGCATGCCGGCGGCCGACTGGCAAGTCATCGAACGCATCCACGCCGGCTGCCTGCGCTTCGTCGACGACGCCTGCGAGGTGGTGGGCGCGGATGCCATCGAGCTGAGCTTCGACCGCAGCCATGTCCAGGTGCCGCTGCACTGCTACGCCTCGGGTTGGTGGCAGCCCGGCAACTGGGCACACGCCCTCGGCGTCGAGGACCGCTACAGCGGCCGCGGCGTCGTGGCCGGCGCGGCGCTCCGGCCGCGCTGA
PROTEIN sequence
Length: 948
VKIAAAIASARSAIERHGGGWRGAYAVARRSARILRALGWQGLAQRIRAANASPAPAMRHAQAAVLPPACPLDQVQLRVGIMLHVFYLDLLDELARDLALMPVPYVLMISVGDEATRAAAMARCRDLPRLQALEVRIVPNRGRDLAPLLLTFRREILALDVVCHLHTKKSLYSGQEQDRWRRYLVERLLGSGGRIAWILGMFQAMPQLGMVYPESFTAVPWWAHTWLSNVADARELGARLGIAVDPAAYLDYPAGSMFWARTAALRPLYELELPLEAFPPEQGQTDGTTQHALERLLGLVVPRQGMLLGILPADGTQSLHSEGERNWHAYFSAPLAHKIGLAALDAELVSFDVFDTLVWRPFLEPAGARAYLGWLVERRHGLAGFAALRARAEHALYLRRGCDATLADIYTELARRPELRGMPMAALQALELDTEQRLLRSRPAVVGAAQALAHDGKRVIAVSDMYLAVDDLRRVLPSATSEPIQAIHVSCANGWRKDGGEVWRRLPELEGVRPQRWLHVGDNEHADVQLPQAMGYIHPVHALRSSALLDLVPALRGLRPDTTQRERWQDQLWLGLLANHCNALADAHPEAFGAQLKLEAPETLGYLVLGPLLLDYATWLARLAGERGVRRILFLSREGHLLLQVFQRMQHAVPGLAGIHANYFLASRRAVHAAALRSIEDLHGVFAAPYTGPLDELIRARLGAPMATALAGQLTRTTLDKEVFLPEMRTQLVELLRPCAAAILEVARAERETYLEYCSNAGVDTATMVADIGYAASIQQGLMRLTGQPLGGAYLALKAAADQVTTQQGWACARFHNARDVEAGEDSPVMRHHLLLEAMLTAPQGQFSHFARKAGAPVPVYATNGMPAADWQVIERIHAGCLRFVDDACEVVGADAIELSFDRSHVQVPLHCYASGWWQPGNWAHALGVEDRYSGRGVVAGAALRPR*