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scnpilot_solids1_trim150_scaffold_9700_curated_1

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(2..2938)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 979.0
  • Bit_score: 1787
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas.;" source="Pseudoxanthomonas suwonensis (strain 11-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 979.0
  • Bit_score: 1787
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI000311D5B7 similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 979.0
  • Bit_score: 1806
  • Evalue 0.0

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Taxonomy

Pseudoxanthomonas suwonensis → Pseudoxanthomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2937
CCGGGCGAGCCGCCGACCAAGGACGCCGCGCAGAACCTGTTCCACAACCTGTTCTTCACCTTCGAGCGCTACGACCTGTCCACGGTCGGCCGCATGAAGTTCAACCGCCGTGTCGGCCGCAAGGAAGTCACCGGCGAAGCCGTGCTGTACGACAGCAAGTACTTCGGCGAGCGCAACGACGAAGAGTCCAAGCGCCTGGTCTCCACCCATGGCGACGGGTCCGACATCCTGGACGTGATCAAGGTCCTGACCGAGATCCGCAACGGCCGTGGCGTGGTGGACGACATCGACCACCTGGGCAACCGCCGCGTGCGTTCGGTCGGCGAAATGGCCGAGAACGTGTTCCGCGTGGGCCTGGTCCGCGTCGAGCGCGCGGTCAAGGAGCGCCTGTCGATGGCCGAGTCCGAGGGCCTGACCCCGCAGGAGCTGATCAACGCCAAGCCGGTCGCCGCTGCCATCAAGGAATTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGAAGTGACGCACAAGCGCCGCGTCTCGGCACTGGGCCCGGGCGGCCTGACCCGCGAGCGCGCCGGCTTCGAAGTGCGCGACGTGCACCCGACCCATTACGGCCGCGTCTGCACCATCGAAACCCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGGCCGTGTTCGCCCGCACCAACCAGTACGGTTTCCTCGAGACCCCGTACCGCAAGGTCGTGGACGGCAAGGTCACCGACGACGTCGAGTACCTGTCGGCGATCGAGGAGAACGAGTACGTCATCGCCCAGGCCAACGCCCTGACCGACGCCAAGAACATGCTCACCGAGCAGTTCGTGCCGTGCCGCTACCAGGGCGAGTCGCTGCTGAAGCCGCCGGCGGAAGTGCACTTCATGGACGTCTCGCCGATGCAGACCGTGTCGGTCGCCGCGGCGCTGGTGCCGTTCCTGGAGCACGACGACGCCAACCGCGCACTGATGGGCGCGAACATGCAGCGCCAGGCCGTTCCGACCCTGCGTGCGCAGAAGCCGCTGGTAGGCACCGGCATCGAGCGCGCGGTGGCGCGTGACTCGGGCGTGACCGTGAACGCCCGTCGTGGCGGCGATATCGTGCAGATCGACGCCGGCCGCATCGTGGTCAAGGTCAACGAGAACGAGATCACCGACGCGTCCGACGCCGGCGTCGACATCTACAACCTGATCAAGTACACCCGCTCGAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGAAGGTGGGCGACGTGATCGCCCGCGGCGACGTGCTGGCCGACGGCCCGTCGACCGACATCGGCGAGCTGGCCCTGGGCCAGAACATGCTGATCGCGTTCATGCCGTGGAACGGCTACAACTTCGAAGACTCCATCCTGCTCTCCGAGCGCGTGGTGGAAGAGGATCGCTACACCACGATCCACATCGAAGAGCTGACCTGCGTCGCGCGCGACACCAAGCTGGGGCCGGAGGAAATCTCGGCCGACATCCCGAACGTCTCCGAGCAGGCGCTGAACCGCCTGGACGAGAGCGGCGTGGTGTACATCGGTGCGGAAGTCCGCGCCGGCGACATCCTGGTGGGCAAGGTCACGCCGAAGGGCGAGAGCCAGCTGACCCCGGAAGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCTTCCGACGTTAAGGACAGCTCGCTGCGCGTGCCGCCGGGCATGGACGGCACCGTCATCGACGTGCAGGTCTTCACCCGCGACGGCATCGAGAAGGACAAGCGCGCGCGCCAGATCGAAGAGAACGAGATCAAGCGCGTCAAGAAGGACTTCGACGACCAGTTCCGCATCCTGGAAGCGGCGATCTACGCGCGCCTGCGCTCGCAGATCGTGGGCAAGGTGGCCAACGGCGGTGCCGGCCTGAAGAAGGGCGACACCATCACCGACGCCTTCCTGGATGGCCTGAAGAAGGCCGACTGGTTCACCCTGCGCATGAAGGACGAGGACGCCTCCGAGGCGATCGAGCGCGCCCAGAAGCAGATCCAGGCGCACGAGAAGGAGTTCGAGCGCCGCTTCGCCGACAAGCGCGGCAAGATCACCCAGGGCGACGATCTGGCCCCGGGCGTGCTGAAGATGGTCAAGGTGTTCCTGGCGGTGAAGCGCCGCATCCAGCCGGGCGACAAGATGGCAGGTCGCCACGGCAACAAGGGCGTGGTCTCCAACGTGGTGCCGGTCGAGGACATGCCGTACATGGCCGACGGCACCTCGGTGGACATCTGTCTGAACCCGCTGGGCGTGCCGTCGCGCATGAACATCGGCCAGATCCTCGAAGTGCACCTGGGCTGGGCCGCCAAGGGCCTGGGCCGGCGCATCCAGAAGATGCTGGAGCAGCAGCGTGCGGTGAACGAGCTGCGCGAGTTCCTCGGCAAGATCTACAACCACGACAGCAAGCTGGCCGGTGATCGCGTCGACCTGTCGCAGTTCAGCGACGAGGAACTGGTGGCGCTGGCCCGCAACCTGACCGACGGCGTGCCGATGGCCACCCCGGTGTTCGACGGTGCGCACGAGGACGAGATCCGCGAGATGCTGAACCTGGCATACCCGGACGGCGACAAGGACACCGAGCAGCTGGGCTTCAACGCCAGCAAGACGCAGATGCAGCTGTACGACGGCCGCACCGGCGAGGCGTTCGACCGCAAGACCACCGTCGGCTACATGCACTACCTGAAGCTGAACCACCTGGTCGACGACAAGATGCACGCCCGTTCGACCGGTCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGTGAGATGGAAGTCTGGGCGCTGGAAGCCTACGGCGCGGCCTACACCCTGCAGGAAATGCTGACGGTGAAGTCCGACGACGTGCAGGGCCGCAAC
PROTEIN sequence
Length: 979
PGEPPTKDAAQNLFHNLFFTFERYDLSTVGRMKFNRRVGRKEVTGEAVLYDSKYFGERNDEESKRLVSTHGDGSDILDVIKVLTEIRNGRGVVDDIDHLGNRRVRSVGEMAENVFRVGLVRVERAVKERLSMAESEGLTPQELINAKPVAAAIKEFFGSSQLSQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGLINSLAVFARTNQYGFLETPYRKVVDGKVTDDVEYLSAIEENEYVIAQANALTDAKNMLTEQFVPCRYQGESLLKPPAEVHFMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVPTLRAQKPLVGTGIERAVARDSGVTVNARRGGDIVQIDAGRIVVKVNENEITDASDAGVDIYNLIKYTRSNQNTCINQRPLVKVGDVIARGDVLADGPSTDIGELALGQNMLIAFMPWNGYNFEDSILLSERVVEEDRYTTIHIEELTCVARDTKLGPEEISADIPNVSEQALNRLDESGVVYIGAEVRAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGTVIDVQVFTRDGIEKDKRARQIEENEIKRVKKDFDDQFRILEAAIYARLRSQIVGKVANGGAGLKKGDTITDAFLDGLKKADWFTLRMKDEDASEAIERAQKQIQAHEKEFERRFADKRGKITQGDDLAPGVLKMVKVFLAVKRRIQPGDKMAGRHGNKGVVSNVVPVEDMPYMADGTSVDICLNPLGVPSRMNIGQILEVHLGWAAKGLGRRIQKMLEQQRAVNELREFLGKIYNHDSKLAGDRVDLSQFSDEELVALARNLTDGVPMATPVFDGAHEDEIREMLNLAYPDGDKDTEQLGFNASKTQMQLYDGRTGEAFDRKTTVGYMHYLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVQGRN