ggKbase home page

scnpilot_solids1_trim150_scaffold_341_curated_36

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(41320..42651)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate-selective porin OprB n=1 Tax=Rhodanobacter denitrificans RepID=I4WUR2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 436.0
  • Bit_score: 757
  • Evalue 6.00e-216
carbohydrate-selective porin similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 436.0
  • Bit_score: 754
  • Evalue 2.10e-215
Carbohydrate-selective porin {ECO:0000313|EMBL:AGG87267.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 436.0
  • Bit_score: 754
  • Evalue 9.30e-215

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1332
ATGCGCAGCGAACCTGGCGCGATCCATGTGCTGACGTACATCGGCGCGCTGTGCCTGGGCATGCTGTGCATGGATACGCTGCCGGCCATGGCGCAACAGGTCGGCAGCGACTGGTTCAGCCGACCCACGCTGACCGGTGACTGGGGCGGCACGCGCACGCGGTTGCAGGACGACGGCATCACCCTGCGCGCGCACTGGACCACCGAAAGCGCGGGCAACCTCTCCGGCGGCCGCGAGCAGACCGTCCGCTATACCCAGCAGCTCGACGCCGGCGCGGATTTCGACCTCGACAAGCTGTGGGGCGTGCCGAACGCGAAGATCCAGTTCACCGTCACCGACCGCCGCGGCCGCAGCCTGAGCAACGATGCGCTGGGCAACCAGTTCTCGGTGCAGGAGCTCTACGGCGCGGGGCAGAACTTCCGCCTGGCCGAGCTGAACTGGCAGCAGAACTTCCTCGACCACCGCTTGTTCATGCAACTGGGCTGGTCGCCGGTGGGCGACGACTTCGCGCGGCTGCCTGCGTTCTGCAATTTCCAGAACGGCATCATCTGCGGCCACGCCAACGCGATGACCACCAACAGCGGCGCGCACAACTTCCCCACCGCGCAATGGGGCGGCCACGTGAAATGGCACGCGACGCCGAACTTCTACGCCACCGTCGGCGCGTACCTGGACAACCCCAACGCCGGCAACCACGACCAGGGCTTCAACCTCAGCTTCAAGCATCGCGGCGTGTTCGTGCCGGTCGAGCTGGGCTGGGCTAGCGGCCGCGGTGCCGGCCAGCTGCCCGGCGACCTCAAGCTTGGCGCGTACTACAACACAGCCGGCACGCCGGACGTCTACACCGACATCAACGGCCAGCCGGCCGGCCTCACCGGCGCCGACTTCCTGCAGCACAACGGCCGCTCCGGAGGCTACGTGATCGCCGACCACATGGTCTACCGCGAAGGCCAGGGCTCCAACCGGGGCCTGACCCTCGGCATGATGGCCGGCATAGGCGACAAAACCACCGCCCGCTTCCGCGACTTCTGGGTGCTCGGTGGCCACTACCAGGGCACCTTCCCCGGCCGCGACAACGACGTGATCTCGTTCATGGTGGCAAGCGGCCGCACCAACCCACGCGTCACGCGCTACCAGCGCGACCGCAACCAGGTGGCACCCGGCAGCGTCGGTATCCAGCGTTACGAAAGCGTGGCCGAAATCGACTACGGCGCAAAGATCACTCCCTGGCTGACCCTGCGCCCCAACCTGCAATACGTGATCCACCCCGGCGGCACCGGCGACATCCCCGACGCCTTCGTCATCGGGCTGTACACGCAGGTGACGTTCTGA
PROTEIN sequence
Length: 444
MRSEPGAIHVLTYIGALCLGMLCMDTLPAMAQQVGSDWFSRPTLTGDWGGTRTRLQDDGITLRAHWTTESAGNLSGGREQTVRYTQQLDAGADFDLDKLWGVPNAKIQFTVTDRRGRSLSNDALGNQFSVQELYGAGQNFRLAELNWQQNFLDHRLFMQLGWSPVGDDFARLPAFCNFQNGIICGHANAMTTNSGAHNFPTAQWGGHVKWHATPNFYATVGAYLDNPNAGNHDQGFNLSFKHRGVFVPVELGWASGRGAGQLPGDLKLGAYYNTAGTPDVYTDINGQPAGLTGADFLQHNGRSGGYVIADHMVYREGQGSNRGLTLGMMAGIGDKTTARFRDFWVLGGHYQGTFPGRDNDVISFMVASGRTNPRVTRYQRDRNQVAPGSVGIQRYESVAEIDYGAKITPWLTLRPNLQYVIHPGGTGDIPDAFVIGLYTQVTF*