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scnpilot_solids1_trim150_scaffold_4202_curated_5

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(4110..4409)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSL3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 97.0
  • Bit_score: 166
  • Evalue 1.70e-38
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 97.0
  • Bit_score: 166
  • Evalue 2.40e-38
integration host factor, beta subunit similarity KEGG
DB: KEGG
  • Identity: 87.9
  • Coverage: 91.0
  • Bit_score: 164
  • Evalue 1.60e-38

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 300
ATGACCAGATCCGAATTGATCGAGACGCTTGCCAGGCGCCAGATGCATCTTGCGTTTGCGGATGTGGAAATGGCGGTCAAGAGCGTGATCGAGCAGATGAGTTCCGCGCTCGCCCACGGCGAACGCATCGAGGTGCGGGGGTTTGGCAGCTTTTCCCTGCATTACCGGGCCTCGCGCATCGGTCGCAACCCCAAGACCGGCGCCACGGTGGCGCTGCCCGGCAAGCATGTGCCGCATTTCAAGCCGGGCAAAGAACTGCGCGAGCGGATCAATCTGGGTCGATCCGGCGCAGGCGAATAA
PROTEIN sequence
Length: 100
MTRSELIETLARRQMHLAFADVEMAVKSVIEQMSSALAHGERIEVRGFGSFSLHYRASRIGRNPKTGATVALPGKHVPHFKPGKELRERINLGRSGAGE*