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scnpilot_solids1_trim150_scaffold_102_curated_96

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(123730..124587)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Nevskia ramosa RepID=UPI0003B5FCC2 similarity UNIREF
DB: UNIREF100
  • Identity: 62.4
  • Coverage: 250.0
  • Bit_score: 321
  • Evalue 7.10e-85
Periplasmic binding protein {ECO:0000313|EMBL:EIT70015.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboniphaga effusa AP103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 253.0
  • Bit_score: 299
  • Evalue 4.10e-78
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 51.8
  • Coverage: 249.0
  • Bit_score: 254
  • Evalue 4.40e-65

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Taxonomy

Hydrocarboniphaga effusa → Hydrocarboniphaga → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGGACAGGCGCTGCCCTAGGAACGTGGGCCTGCCCCTGGTCGCATCCCTCTGCGTGCGCCACACTGGCAGCGACTGCAAGGTTGCCGAGATGCGCATTATTTCCCACACCTGTTCCAACACCGAGATCGTCTGTGCGCTGGGTTGCGCCGACCAGTTGGTTGGCGTCGATGCCGACTCCGACTATCCGCCAGACGTTGTGACCAAGCTGCCCAAGCTGGGACGCGACCTGAGCCTCGACGTGGCGGCAGTGCGCAAACTGGAGCCCGACCTGGTGCTGACCTCGCTCACCGTGCCGGGACATGAGCGCGTGGTCGCGGCGCTCCAGGTCGCCGGACTGCAGATGCTGGTGTGCGACCCGCAATCGCTGGACGATGTCTACGCCGACATTCACCGCATCGCCGCGACGCTCGGCGTGGCTGCGCGCGGCGTGGCGCTGGTGGCATCGATGCAGGCGGCCATGCCAGCCGTCACGCCGCTGGGCAGGCGCCCACGCGTCCTGGTCGAGTGGTGGCCCAAGCCGGTGATCGCGGCGGCGCGGCACTCCTGGGTCAGCGACATCATCTGGCGCGCCGGCGGCAGCAATCCGTGGGCCGAGGTTGACGCCAAGAGCGTGCCAATGGAATACGCTGACGCGGCGGCAAAGCAACCGGAACTGGTTGTCATGAGCTGGTGCGGCGTAAAGGTCGAGCACTACCGCACCGACAAGGTGCGTACCCGCCCTGGATGGGAAGTAGTTCCCGCGGTGGTAAACGACCATATCGTTCCCATCAGCGAGGAGTTTCTCGGCCGTCCCGGTCCGCGTCTGGTGGAAGGCTATCGACAGTTGCGCACGGCCATCGCCAACCTGCCAATCTGA
PROTEIN sequence
Length: 286
VDRRCPRNVGLPLVASLCVRHTGSDCKVAEMRIISHTCSNTEIVCALGCADQLVGVDADSDYPPDVVTKLPKLGRDLSLDVAAVRKLEPDLVLTSLTVPGHERVVAALQVAGLQMLVCDPQSLDDVYADIHRIAATLGVAARGVALVASMQAAMPAVTPLGRRPRVLVEWWPKPVIAAARHSWVSDIIWRAGGSNPWAEVDAKSVPMEYADAAAKQPELVVMSWCGVKVEHYRTDKVRTRPGWEVVPAVVNDHIVPISEEFLGRPGPRLVEGYRQLRTAIANLPI*