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scnpilot_solids1_trim150_scaffold_917_curated_15

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(16629..17273)

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; Flags: Fragment;; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 327
  • Evalue 1.80e-86
3-isopropylmalate dehydratase small subunit (Fragment) n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WCE5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.6
  • Coverage: 201.0
  • Bit_score: 327
  • Evalue 1.30e-86
3-isopropylmalate dehydratase, small subunit similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 195.0
  • Bit_score: 308
  • Evalue 1.90e-81

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGAAGCCCATCACCACCCTGCGCTCGCGCACCGCCGTGCTCGCCGACGAAAACGTCGACACCGACCGCATCATCCCGGCGCGCTTCCTCACTACCACGACGCGCGCCGGCCTGGGTCGGCACTGCTTCCAGGATTGGCGCTACCTGGCCGACGGCAGCGACAACCCGGCCTTCCCGCTGAACCAGCCCGCGGCACGCGGCTGCGCCATCCTGGTCGCCGGGCACAACTTCGGCTGCGGCTCCTCGCGCGAGCACGCGCCGTGGGCGCTGCTGGACTACGGCATCCAGGCCGTGCTGAGCAGCGAGATCGCGGACATCTTCCGCAACAACGCGCTGAAGAACGGCCTGCTCGCCATCGTGGTCAGCGAGCCCGAATACCGCTGGCTGCTGGCCAACCCCGGCGTGGAGCTCCACATCGACGTACGCAGCCAAGCCATCAGCTTGCCGGACGGTAGCCAGCTGCGGTTCGAGCTGGAACCCTTTGCACGCCATTGCCTGCTCGAAGGCGTCGACCAGCTCGGGTTCCTGCTGCAACAAGGGGATTTGATCGATGCGTTCGTCCGTGAGCGCGAAAGTCAAGCAGCGGCCAGCCCTGGCCGCACTTCTCACGAAAGCCTCTCACCCACCACCGGGGCGAACGCATGA
PROTEIN sequence
Length: 215
MKPITTLRSRTAVLADENVDTDRIIPARFLTTTTRAGLGRHCFQDWRYLADGSDNPAFPLNQPAARGCAILVAGHNFGCGSSREHAPWALLDYGIQAVLSSEIADIFRNNALKNGLLAIVVSEPEYRWLLANPGVELHIDVRSQAISLPDGSQLRFELEPFARHCLLEGVDQLGFLLQQGDLIDAFVRERESQAAASPGRTSHESLSPTTGANA*