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scnpilot_solids1_trim150_scaffold_917_curated_17

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(18682..18921)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 71.0
  • Bit_score: 89
  • Evalue 3.00e-15
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 69.0
  • Bit_score: 83
  • Evalue 3.70e-14
2-isopropylmalate synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXY2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 71.0
  • Bit_score: 89
  • Evalue 2.20e-15

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
GACGTGGGCATTGCCGCCACCACCCTGGTGCTGGGCAAGCATTCCGGCCGCGCCGCGCTGCGCCAGCGCCTGCAGGCACTGGGTTACGCGCCGGACGACCACGGCCTGGACGCGCTCTTCATCGGCTTCAAGCAGCTGGCGGATGCCCGCGGCGAGGTCAATGACGACGACTTGCACACCTTGGCCCGGGAGGCCGATCTCCGAGCCGATGCCACACAAGCCACGGGAGCCGTCGCATGA
PROTEIN sequence
Length: 80
DVGIAATTLVLGKHSGRAALRQRLQALGYAPDDHGLDALFIGFKQLADARGEVNDDDLHTLAREADLRADATQATGAVA*