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scnpilot_solids1_trim150_scaffold_113_curated_58

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(63528..65876)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KGE9_SHEWM similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 697.0
  • Bit_score: 645
  • Evalue 7.70e-182
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 697.0
  • Bit_score: 645
  • Evalue 2.40e-182
TonB-dependent receptor {ECO:0000313|EMBL:ACA88286.1}; Flags: Precursor;; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 697.0
  • Bit_score: 645
  • Evalue 1.10e-181

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Taxonomy

Shewanella woodyi → Shewanella → Alteromonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2349
ATGAACTTGTCGTCCCGACGTCGCCAATCACGCCACGGGGAAACACAGCTCGCATCACCGGCACGGCCTGGATTGGGTTTGACCCAGCTCGGTCTCGGCATTGCCCTTGGGCTGTGTGGGGCACTGGCGGCGACCCAGCAGGCGATCGCCGCACCCTCCGGGACCGGCACCGCGGAACAAGTACAAGCCGATCAGACGGCCGCTGCGCCCGCAGCGAAGGACGACGACACGAAGCGTCCCAGGCCGAACGCGAAGAACAGCACGACGCTCGGAACCATCACCGTGACCGCGCGCGAACGCTCCGAATCCATACAGAACGTGCCGATCGCCATCACCGCTTTCACCAGCCAGCAGATCATCGACGCCGGCATCCAGTCGCCAGCCGACTTCGTGCAACTGACACCGAACGTGAGCATGGTGACGGCGCAAAACCGGGGCACCGACTTCCTGACCGTCCGCGGCATCAGCCAGGTGCGCAACGGGCAACCACCCGTGGCCACCGTCGTCGACGGGGTACAGCAGGTCAGCCCCAACCAGTTCAACCAGGGCCTGTACGACATCCAGAGCATCGAGGTGCTCAAGGGCCCGCAAGGCGCGCTGTACGGGCGCAACGCAGTCGGCGGCGCCATCCTCATCACCACCAAGCCGCCATCGGCCACTCCCGAAGCCTGGGTGCAACTGGGGGTCGGCAACGGCAACAGCCGAAGCGGCTCGTTCAGCCTCAGCGGCCCGATCGGCGACGGGCGCGTGCGCTACCTGGTAGCCGGCATGGACGACTACTTTGGCGGCCTCATCGAGAATACCTATCTGCACAAGCCGGTGGACGGCGTGACGGACCAGGGCTTGCGCGCTCGCCTGACCGCGGACATGGGCGACCGTTTCACCCTCGACACCCAGGCCAACTACTCGCGCAGCATCGGCCACGCGCTGCAATACGTCTTCCAGCCGCTGTTCGGCATCAACGACGCCAACGACACGTCCATACCGATCACCTCGAACAACCCCGGCTACGACCGCCGCGTACTCGGGCACTTCTCGACCAAGGGCGACTACCGCACCGATTTCGGAACGCTGACCACGGTCGTGGCCCTGGATCACATCAACGAGTACTACGACGGCGACAATCTTCCATATACGCCCGCCATTTCCGCGAATGCGCCGCTCGGCCCCGGGACGGACGGGACGCAGAACCAATACGTGGACACCAACGCCGAACAGGCGGAACTACGCTTCACCTCGCCTTCCGACCAACGGCTGCGCTGGATTGCAGGCGTTTCATACCTGCATAGCCGGACCTACCTGTCCACCACGACCGGACTCGACCTGGGCCTGGGCATCGCCCACGTACAGAAATTTCCCGCCCCGGCCGACAGCATCAGCCCCACCACCGCATTCTTTGCCGACCACAACACCGAGAACACCGCCTCGGTATTCGGGCAGGTGGCCTACGATCTCACCCCTCAGCTCGAGGCCGACCTGGCGTGGCGCTACGACCGCAACACCCACAGGCAGCTGAATGCCGCGCCGGTGGCCTTCGACCCGAATTCCGGCCAGGTACGCCGCGCCACCTTCAGCAAGGGCCAACCGAAGTTCACCTTGACCTACAAGCCGGACAGCGGCTTCACGCTGTACGGCAGTTACGGCGTGGGCTTCCGCGTCGGTGGCTTCAACCAGAGCGGCACCGGCGCACTGGCGGCCACGGTGGGGGTGCCCGGCGTTTCCGACAAGTACGAGCCGGAAACCGCAAAGACCGCGGAGCTCGGCTTCAAGAGCCGGCTCGCCAATGACCGGCTGGAAATCCACGGCGACGTGTTCGACACCGAAGACCGCAACCAGCTGTATTTCGTCTTCGTGGGCGATCTCGGCGCGCAGGTGCTGGCCACGATCGACAAAGTCAAACTGCAAGGGTATGAGCTGAGTGCGCAGTACCGCCTGGTCGATGACCTCACGCTCTATGGTGCCTATGGCTACACGCAGAGTGAAATCAAACGCTACACCCTCAATCCAGCTGACGTCGGCAATGTCGGCCCCTATACGCCCCGGTATACCTCGAATGCTGGTTTGCAATATTCACCAACATTGAGCAACAGCCTCAACGGCTTGTTCCGCATCGATTATCAGGTCATCGGCCCGCAGTACTGGGACCTGGAAGACAGCACCCGGCGCGACGCCGTCAAGCTGCTGGGCCTCAGGGCCGGCATCTCCAGCTGGGACGGCAAGTGGACCGCAACGCTGTGGGCCAAGAACGCGACCAACACCCGGTACAACGCCGAGTACGTGCTCGGCGGCTTCGCCCAGATCGCGGAGCCGCGCAGCTACGGCATCGACTTCCGCTACAACTTTTTCTAG
PROTEIN sequence
Length: 783
MNLSSRRRQSRHGETQLASPARPGLGLTQLGLGIALGLCGALAATQQAIAAPSGTGTAEQVQADQTAAAPAAKDDDTKRPRPNAKNSTTLGTITVTARERSESIQNVPIAITAFTSQQIIDAGIQSPADFVQLTPNVSMVTAQNRGTDFLTVRGISQVRNGQPPVATVVDGVQQVSPNQFNQGLYDIQSIEVLKGPQGALYGRNAVGGAILITTKPPSATPEAWVQLGVGNGNSRSGSFSLSGPIGDGRVRYLVAGMDDYFGGLIENTYLHKPVDGVTDQGLRARLTADMGDRFTLDTQANYSRSIGHALQYVFQPLFGINDANDTSIPITSNNPGYDRRVLGHFSTKGDYRTDFGTLTTVVALDHINEYYDGDNLPYTPAISANAPLGPGTDGTQNQYVDTNAEQAELRFTSPSDQRLRWIAGVSYLHSRTYLSTTTGLDLGLGIAHVQKFPAPADSISPTTAFFADHNTENTASVFGQVAYDLTPQLEADLAWRYDRNTHRQLNAAPVAFDPNSGQVRRATFSKGQPKFTLTYKPDSGFTLYGSYGVGFRVGGFNQSGTGALAATVGVPGVSDKYEPETAKTAELGFKSRLANDRLEIHGDVFDTEDRNQLYFVFVGDLGAQVLATIDKVKLQGYELSAQYRLVDDLTLYGAYGYTQSEIKRYTLNPADVGNVGPYTPRYTSNAGLQYSPTLSNSLNGLFRIDYQVIGPQYWDLEDSTRRDAVKLLGLRAGISSWDGKWTATLWAKNATNTRYNAEYVLGGFAQIAEPRSYGIDFRYNFF*