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scnpilot_solids1_trim150_scaffold_113_curated_91

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(105716..106087)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L124_FRAAD similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 123.0
  • Bit_score: 142
  • Evalue 2.60e-31
Helix-turn-helix protein similarity KEGG
DB: KEGG
  • Identity: 60.2
  • Coverage: 123.0
  • Bit_score: 142
  • Evalue 8.10e-32
Helix-turn-helix protein {ECO:0000313|EMBL:AFC87179.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 123.0
  • Bit_score: 142
  • Evalue 3.60e-31

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Taxonomy

Frateuria aurantia → Frateuria → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGCCCCGTTCCGCGCCTCATGCCGCTTTTGCCAACCGCCTGCAGCAAGCCTGCGACGAGGCGGGCGTGCCCGACGGACGTCAACGCGTGATTGCGGTGGCCACCCATTTCGGCGTAGCCCGCGAAACGGCCAGACTGTGGTTCGCCGGGCGCGCCCTGCCCGAGCTGTCGCGGCTGATCGAGATCGCCGAGGAGTATCGCTGCAGCCTGGACTGGCTGGCGATGGGGCGCGCGGCAGCCTCCGCTCGAATCGGCGAACAGGCTTCAGGCTACGGAGCGCTATCGGCGCAGGAGCGGCGCGTAATCGCGATCATGCGCGAGCTCACCGCGAAGCGCCGCAACGGTCTGGTGGCGTTCCTCGGCGAGCAGTGA
PROTEIN sequence
Length: 124
MPRSAPHAAFANRLQQACDEAGVPDGRQRVIAVATHFGVARETARLWFAGRALPELSRLIEIAEEYRCSLDWLAMGRAAASARIGEQASGYGALSAQERRVIAIMRELTAKRRNGLVAFLGEQ*