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scnpilot_solids1_trim150_scaffold_1147_curated_10

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: 7407..8204

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, AraC family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZY3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 38.9
  • Coverage: 275.0
  • Bit_score: 169
  • Evalue 5.50e-39
Uncharacterized protein {ECO:0000313|EMBL:KFX67710.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.5
  • Coverage: 256.0
  • Bit_score: 175
  • Evalue 8.20e-41
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 233.0
  • Bit_score: 146
  • Evalue 9.20e-33

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Taxonomy

Pseudomonas taeanensis → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGGCGACCCCCCGTGCGGTTTGGATCGATTTTTGCAGAATGCCCCATGCGCATGGCCTCTTTGTGGATGCGCAAGCCGAATGCGATATCGTGCGCATCACCATGACCGAGGCGATCGCCTCGGCTGTCCACAGGCACCAGCCGCACTTCATCTGCATCGAATACGACTATCCCGACCGGGCACGGCTCCGGGCCGTGCCGTTGACGAGGCGCCAATTCCCGGCGCTGCCGCTGCTGATGCTCACCGAGTTTCATTCCGAGGCCCTCGCGGTCTGGGCGTTTCGCTCGCGCGTGTGGGATTACCGGGTCAAGCCAATTGACGAAAGGACACTCGCCCAGCTCGTCGACGCGGCGGCACGCGCCAGCAGGACGGCACCGGGCGACGGCTGGGTGGTCCAGCCTTTTCCGCCCGACCTGATCGCACCCACGGGGCATCTGTGCAGGCCGCTGATCGCCGCACCGCACACGGCCCCCGCCGTCGCCTACATCAGCGAGCACTACGCGGAAGCGTGCCGGATCGAAACCATCGCGCGACTTTGCCATCTGTCCGAGTCCGCGTTCAGCCGCCTGTTTCACCGCGAGCAGGGCGTCTCGTTCAGACGCTTCCTGCTGCAATACCGGATCGCCAGGGCGCGCGATTTCCTGGCCGAGCCCCATGCGTCGGTTTCGCAGGTAGCGTACGCCGTCGGCTTCAACGACTTGTCCCATTTTGGACGGGTGTTCAGGCGCATCGTCGGCATGCCTGCCACCCACTACCAACGCAATCTTCAGCTGCCCACGCAAACCGCACGGACATGA
PROTEIN sequence
Length: 266
MATPRAVWIDFCRMPHAHGLFVDAQAECDIVRITMTEAIASAVHRHQPHFICIEYDYPDRARLRAVPLTRRQFPALPLLMLTEFHSEALAVWAFRSRVWDYRVKPIDERTLAQLVDAAARASRTAPGDGWVVQPFPPDLIAPTGHLCRPLIAAPHTAPAVAYISEHYAEACRIETIARLCHLSESAFSRLFHREQGVSFRRFLLQYRIARARDFLAEPHASVSQVAYAVGFNDLSHFGRVFRRIVGMPATHYQRNLQLPTQTART*