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scnpilot_solids1_trim150_scaffold_365_curated_18

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(17161..17928)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.5
  • Coverage: 254.0
  • Bit_score: 418
  • Evalue 7.00e-114
tRNA pseudouridine synthase A n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VK36_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 254.0
  • Bit_score: 418
  • Evalue 5.00e-114
pseudouridylate synthase I similarity KEGG
DB: KEGG
  • Identity: 79.4
  • Coverage: 253.0
  • Bit_score: 415
  • Evalue 1.70e-113

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGCGCATCGCCTTGGGTATTGAGTACGACGGCACCGATTACCTCGGCTGGCAACGCTTGGTCGAGGGGGCGAGCGTGCAGGCGGTGGTCGAACGGGCCTTGTCCCAGGTCGCCGCGCATCCCGTGGCCGTGCGTTGCGCCGGTCGCACCGACACTGGCGTACATGCCCACTGCCAGGTCGTGCATTTCGATACCGGGGCGCAGCGCGACATGTACGGTTGGGTCCTCGGTGCGTGTTCCAACCTGCCGGCCAGTGTTGCCGTGCTGTGGGCGCAGCCGGTGGCGCCGGATTTCCACGCACGCTTTGCCGCCCGCAGCCGTCGCTATCGCTACCGTATCCTCAATCGACCGGTGCGCGCGGCCCTGGATGCGCGCTGGGTGACCTGGGAGCGCCTGCCGCTGGATGCGTCGGCGATGCACGCGGCGCTGCAGGGGCTGCTTGGTGCGCACGATTTCACCGCGTTCCGCGCGCTGTCATGCCAGGCCAAGCACCCGCTGCGTACCGTGCTTGCAGCCAGCGTGCGCCGCGAAGGCGAGCAGGTACTGGTGGAGATCGAGGCCAACGGCTTCCTGCATCACATGGTGCGCAACATCGTCGGCTCGCTGCTCCTGGTTGGTCGCGGCGAGCAACCGGTACCCTGGCTAGCCGAATTGCTGGCCGGCCGCAACCGCCAGGTCGCCGGGCCGACCGCGCCTTCCAGCGGGCTGACCTTCATCGGCCCGCGCTACGAGTCGCACTGGGGACTTCCCGCCGAGGTGACGGCATGA
PROTEIN sequence
Length: 256
MRIALGIEYDGTDYLGWQRLVEGASVQAVVERALSQVAAHPVAVRCAGRTDTGVHAHCQVVHFDTGAQRDMYGWVLGACSNLPASVAVLWAQPVAPDFHARFAARSRRYRYRILNRPVRAALDARWVTWERLPLDASAMHAALQGLLGAHDFTAFRALSCQAKHPLRTVLAASVRREGEQVLVEIEANGFLHHMVRNIVGSLLLVGRGEQPVPWLAELLAGRNRQVAGPTAPSSGLTFIGPRYESHWGLPAEVTA*