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scnpilot_solids1_trim150_scaffold_365_curated_27

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(26534..27115)

Top 3 Functional Annotations

Value Algorithm Source
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 197.0
  • Bit_score: 255
  • Evalue 7.80e-65
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2) similarity KEGG
DB: KEGG
  • Identity: 63.5
  • Coverage: 192.0
  • Bit_score: 251
  • Evalue 2.50e-64
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WBT3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 197.0
  • Bit_score: 255
  • Evalue 5.50e-65

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 582
TTGGATAAGCACCCGGCCGCCGGCGCCACCGTCTCGTCGGAGGCCGAGGAATTGATCCTGGTCGATGCGCTGGACCGCGTCCTTGGCCACGCCAGCAAGGCTGCCTGCCACGATGGGGAAGGCGTCCTGCATCGTGCGTTCTCCCTGTTCGTGTTCAACCCTGACGGCGCCTTGCTGTTGCAGCAACGCAGCGCCGGCAAGCGCCTGTGGCCGGGCTACTGGGCCAACACCTGTTGCAGCCATCCGCGCCGTGGCGAGAGCCTGGATGTAGCCGCGCAACGCCGCCTGCAGCAGGAAATGGGCATGCGCTGCGAGCTGCGCTACGTGTACAAGTTCCAGTACCAGGCGCGCTATGGCACGTCGGGCTCGGAGCATGAGTTGTGTTCGGTGTTTGTCGGCACCACGGACGCGCCCGTGCAGCCAAACCGCACCGAAGTCGCGGCGTGGCGCTTCATCCTGCCCGAGGCGCTGGACACGGAGATGGCGACCTCGGCCGCACAGTTCACGCCGTGGCTGCAGCTGGAATGGCAGCGCCTGCGGGGCGACTTCCGGCACGAGCTGCCCGCGCCGCCGCCCGGCTGA
PROTEIN sequence
Length: 194
LDKHPAAGATVSSEAEELILVDALDRVLGHASKAACHDGEGVLHRAFSLFVFNPDGALLLQQRSAGKRLWPGYWANTCCSHPRRGESLDVAAQRRLQQEMGMRCELRYVYKFQYQARYGTSGSEHELCSVFVGTTDAPVQPNRTEVAAWRFILPEALDTEMATSAAQFTPWLQLEWQRLRGDFRHELPAPPPG*