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scnpilot_solids1_trim150_scaffold_145_curated_60

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(62894..64189)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein DksA n=2 Tax=Rhodanobacter denitrificans RepID=M4NEI0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 55.1
  • Coverage: 443.0
  • Bit_score: 400
  • Evalue 2.40e-108
RNA polymerase-binding protein DksA similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 443.0
  • Bit_score: 400
  • Evalue 7.50e-109
RNA polymerase-binding protein DksA {ECO:0000313|EMBL:AGG88352.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.1
  • Coverage: 443.0
  • Bit_score: 400
  • Evalue 3.30e-108

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1296
ATGCATGGTGATGAGGATATGGCGAAGAACAATGGTCGTACGAGTTCTGCCAAAGTGCAGACGAAAGGAAAATCCAACGGATCTGGTCGTACCGCGGCGCGTGTCAAGCCGGCGGCTGCACCAGCGGCGAAAGGCGGCAAGTCGGCGAAGAAGCCGGTGGCCAAGCCGGCGTCGACCCAGGCGATCAAGCCTGCCGTGAAAGCCGCGGCGAAGAAATCGGCAGCGAAGGCTGCACCGGCACGGGCGGCCAAGCCGGCGCGCAAGTCGGCCGGCAGTCCGGCCAAGCCGGCGACGAAGCCGGGCGTGAAAAAGGGCGCCGGCGTGAAGAAGGCGCCGACGGTGGCCAAGGCCGGTAAGCGCCCACCAGCTCCCGCCAAGGCGGCCGCTGCCCCCAAACCCGGCAAGGCGGGCACGAGCAAGGCTGCTGCGCGCAAGCCGGTATCGACGCCTGTCCGCGGCAAGGCTGCGGTGGGCAAGTTGCCCGGCAAGGCCGCCGCATCGCGGCCGAGCGCGGCAAAGCAGCAGTACAAGCCGGCAGCGATGCCACGTGGCAAGTCGACCGCTGGCCATGCGTCCGTGGCGACGCCGCATGGCGGGCACAGGAAAACGTCCGCTGCGGCGGCTTCGGCGCCAGCCCGGCCGACCCATGCGCCCGTCGTACCGGTGCCCAAGCCGGTCAGCAACGCGCCGGGTTCGCCAAGCTTCAAGGGACGGATTGCCAGCGCCACGGCCATGGTGACCACGCGACAACCCAAGGCGGCCCCCACGGCCGGCTCCCACAAACATTCCAAGCATTCTTCAGACTCAATGAATAAAAGTGCGGTAACCAACCTGGACAATGGCGTCACCCGTGAGGACGGGCGCTACGCCCTTCCCGCCACCAGTACGATCGAACTGCCGCGCGGTTATGTACCCGGCCCCAAAGAGGAGTACATGAGTCCGCGCCAGCTCGCGTATTTCCGCAACAAGTTGCGTACCTGGCGTGCGCAGCTGGTGGAGGAGTCGCGGCAGACCATGGACAACCTGCGCGAGGAAGTGCGCGACGTGGGTGACGAAGCGGAGCGTGCGACGCGCGAGACGGAAAATTCGCTGGAGCTGCGTACCCGCGACCGCTATCGCAAGTTGATCGCCAAGATCGACAAGGCACTGCGTCGCATCGAGGACGGCACCTACGGTTTCTGCGAGGAAACCGACGAGGAGATCGGCGTCGAGCGCCTCGACGCGCGGCCGATCGCCACGCTGTCACTCGATGCCCAGGAGCGCCGCGAACATCTGCAAAAGCAGATGGGCGACTAG
PROTEIN sequence
Length: 432
MHGDEDMAKNNGRTSSAKVQTKGKSNGSGRTAARVKPAAAPAAKGGKSAKKPVAKPASTQAIKPAVKAAAKKSAAKAAPARAAKPARKSAGSPAKPATKPGVKKGAGVKKAPTVAKAGKRPPAPAKAAAAPKPGKAGTSKAAARKPVSTPVRGKAAVGKLPGKAAASRPSAAKQQYKPAAMPRGKSTAGHASVATPHGGHRKTSAAAASAPARPTHAPVVPVPKPVSNAPGSPSFKGRIASATAMVTTRQPKAAPTAGSHKHSKHSSDSMNKSAVTNLDNGVTREDGRYALPATSTIELPRGYVPGPKEEYMSPRQLAYFRNKLRTWRAQLVEESRQTMDNLREEVRDVGDEAERATRETENSLELRTRDRYRKLIAKIDKALRRIEDGTYGFCEETDEEIGVERLDARPIATLSLDAQERREHLQKQMGD*