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scnpilot_solids1_trim150_scaffold_4760_curated_2

Organism: solids_Rhodanobacter_4

partial RP 24 / 55 MC: 2 BSCG 23 / 51 MC: 2 ASCG 9 / 38
Location: comp(220..2217)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer coupling protein TraG n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WP24_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 665.0
  • Bit_score: 1274
  • Evalue 0.0
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:EIM01216.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 665.0
  • Bit_score: 1274
  • Evalue 0.0
conjugal transfer coupling protein TraG; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 665.0
  • Bit_score: 1143
  • Evalue 0.0

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1998
ATGAACGGAACCAGTGTGCTGTTCGGCCAGGTCTTGGCGGTGATCAGTATCGTGGTCGCAGGAACATGGGCTGCGACCCAATGGACCGCCGCACACCTGGGCTATCAGTTACGCCTCGGCGCGCCCTGGTTCGACCTGTTTGGCATGCCTTTCTATCGCCCGTGGCGGCTGTTCGAGTGGTGGTACTGGTACGACGCTTACGCGCCGCGCCTGTTCCTCAAGGGCGGCGCCATCGCCGCGGCAAGCGGCTTCACTGCCGCGTTCGTCGCCATCGGCATGTCGGTGTGGCGCGCGCGGCAGTCACGGCGCGTCACCACTTACGGCTCGGCGCGCTGGGCCGATGCAAAGGAAATCCGCAAGGCCGGATTGACCGGCACCGCGGGTGTTTTCCTCGGCCTCCATCGTGATCGCTACCTGCGGCACGACGGCCCCGAGCACGTCTTGACCTTCGCGCCGACGCGCTCGGGCAAGGGCGTGGGCCTGGTGGTGCCGACGCTACTCACTTGGCCGGCCTCGGTCGTGGTCCACGACATCAAGGGCGAGAACTGGCAGCTCACCGCCGGCTGGCGCGCGCGTTTCTCGCACTGCCTGTTGTTCAATCCCACCGATGCGCGCTCTGCTGCCTACAACCCGCTGCTGGAAGTGCGGCGCGGCGTGCATGAGGTGCGCGACGTGCAGAACATCGCCGATATCCTCGTTGATCCCGAAGGCGCATTGGAGCGGCGCAATCATTGGGAGAAGACCAGTCACGCGCTGCTGGTCGGCGCAATCCTGCACGTGTTGTATGCGGGCACCGACAAGACGCTGCGGGGTGTTGCCAACTTTCTCTCCGATCCGGCGTGTCCGTTTGAGCTGACGCTGCATCGGATGATGACGACGAAGCATCGGGGCGAGACGCCGCACCCGGTCGTCGCCTCCGCGGCACGTGAAGTGCTCAACAAGAGCGACAACGAGCGTTCGGGCGTGCTGTCTACCGCCATGTCATTCCTGGGTCTCTACCGCGATCCCACGGTGGCCGAAGTCACCGCGCGTTGCGACTGGCGCATCGCCGACCTGATCTCGGCCGAACATCCGGTGTCGCTGTACCTGGTCGTGCCGCCATCCGACATCAGCCGCACCAAACCATTGATCCGACTGATCCTCAACCAGATCGGCCGGCGCCTGACCGAATCGCTGGACGGCTCGGACGGTATCGCGCGCCGGCATCGTCTGCTGCTGATGCTCGACGAGTTCCCGGCGCTCGGCCGGCTCGACTTCTTCGAGTCCGCGTTGGCCTTCATGGCGGGCTACGGCATCCGCAGTTTCCTGATCGCGCAGAGCCTGAATCAGATCGACAAGGCGTATGGCGCCAATCACTCGATCCTGGATAACTGCCATGTGCGCGTGACGTTCGCCACCAACGACGAACGCACTGCCAAGCGCATTTCCGAGACGCTGGGCACCGCGACCGAACTGCGCGCGCAGCGCAACTATGCCGGCCATCGGCTCGCGCCCTGGCTTGGGCACCTGATGGTGTCGCGCCAGGAGACGGCGCGCCCCTTGTTGACGCCCGGCGAGGTGATGCAACTCCCACCCGACGATGCCGTGGTGATGGTCTCGGGCCATGCGCCGATTCGTGCGAAGAAGCTGCGCTACTACACCGATGCCAACTTCAAGCGCCGCGTGCTCGCGCCGCCGGTGTTGGCGAGCGGCCCTTATGTCGATGCACCGACGTGGCGCGCTGACGACTGGAGCGCACTGCCTATTCCCGTGATGCCGAGCGCGTCTGCCGCAACGATCACGCTGCCTGAAGGCGCGACCGACGACGGCGGCCTGCGGCGCCAACCCGAGCTGGCCGACGAGGTGATCTATGTCCCGGCGCCCGACAGAGTGGCCGACGACCTGGCGATGCTCGATGACGATGACCTGCCATGGCCGGTTCCCGCCCAGCTCGATCCACGCCTGCAACGTACGGCACGGCTGGCCACGCTCGATCCGGCGGACGGAATACCGCTATGA
PROTEIN sequence
Length: 666
MNGTSVLFGQVLAVISIVVAGTWAATQWTAAHLGYQLRLGAPWFDLFGMPFYRPWRLFEWWYWYDAYAPRLFLKGGAIAAASGFTAAFVAIGMSVWRARQSRRVTTYGSARWADAKEIRKAGLTGTAGVFLGLHRDRYLRHDGPEHVLTFAPTRSGKGVGLVVPTLLTWPASVVVHDIKGENWQLTAGWRARFSHCLLFNPTDARSAAYNPLLEVRRGVHEVRDVQNIADILVDPEGALERRNHWEKTSHALLVGAILHVLYAGTDKTLRGVANFLSDPACPFELTLHRMMTTKHRGETPHPVVASAAREVLNKSDNERSGVLSTAMSFLGLYRDPTVAEVTARCDWRIADLISAEHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIARRHRLLLMLDEFPALGRLDFFESALAFMAGYGIRSFLIAQSLNQIDKAYGANHSILDNCHVRVTFATNDERTAKRISETLGTATELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDDAVVMVSGHAPIRAKKLRYYTDANFKRRVLAPPVLASGPYVDAPTWRADDWSALPIPVMPSASAATITLPEGATDDGGLRRQPELADEVIYVPAPDRVADDLAMLDDDDLPWPVPAQLDPRLQRTARLATLDPADGIPL*