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scnpilot_solids1_trim150_scaffold_17397_curated_2

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: 1620..1928

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoH n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ24_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 103.0
  • Bit_score: 198
  • Evalue 4.30e-48
alternative sigma factor RpoH; K03089 RNA polymerase sigma-32 factor similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 103.0
  • Bit_score: 175
  • Evalue 7.10e-42
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 103.0
  • Bit_score: 198
  • Evalue 3.50e-48

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
ATGTCTCAAGCCTTGGTGACCGCCAACTTCCCGCTGCCGAGTGTCGTCGGCAGCCTGGATGCGTACATTTCCGCGGTCCATCGCATTCCGGTGCTGAGCTCGGAAGAAGAGCAGGCGCTGTCACGCGACTATCTCGAGGACGCCAACCTGGCGGCCGCGAAGAAGCTGGTGATGTCGCACCTGCGCTTCGTGGTGCACGTGGCGCGTGGCTACAGCGGCTACGGCCTGCAGCTGGCCGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCGGTCAAGCGTTTCGACCCCGACCAGGGCGTGCGC
PROTEIN sequence
Length: 103
MSQALVTANFPLPSVVGSLDAYISAVHRIPVLSSEEEQALSRDYLEDANLAAAKKLVMSHLRFVVHVARGYSGYGLQLADLIQEGNIGLMKAVKRFDPDQGVR