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scnpilot_solids1_trim150_scaffold_274_curated_6

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(4772..5473)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 460
  • Evalue 1.50e-126
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 233.0
  • Bit_score: 408
  • Evalue 1.50e-111
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W474_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 460
  • Evalue 1.00e-126

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
ATGAAACTGGTCAAGCTGATCGCCAACCTGGGTTATGGCAGCCGCAAGGATGTCACGGCGCTGTTCCGTTCCGGCCGCATCACCGATGCCGATGGCGAAGTGCTGTACGCCGACGACGTGGTGCCGTACGAGACCATCCGCGTCGACGACGAACCGCTCGATCCGCCGCCCGGCCTGGTGCTGATGCTGAACAAGCCGCTGGGCGTCACCTGCTCGCGCAAGGACCCGGGACGGGTGGTCTACGACCTGTTGCCGCCGCGCTACAGCGTGCGCTCGCCGGCGCTGTCCAGCGTGGGCCGGCTCGATCGGGACACCTCCGGCCTGCTGCTGTTCACCGACGACGGTGCGCTGCTGCACCGGATCATTTCGCCGAAGGCGCAGGTGACCAAGGTCTACGAGGCGACGCTGGCGCAGGATCTGCGCGGCGACGAAGGCGCGCTGTTCGCCAGCGGCAGCCTGATGCTGGAATCGGAGAAGGAGCCGCTGGCGCCGGCGAACCTTGAAGTGCTGGGCCCGCGCCATGCCCGGCTCAGCGTCACCGAGGGCCGCTATCACCAGGTGCGGCGGATGTTTGCCGCCACCGGCAACCATGTCGAGACCCTGCAACGGATCTCGGTGGGCAGGCTCGCGTTGGGCGAGCTGCCGCTGGGCGAATGGCGTGCGCTGGATGCCGACGAGGTCGCGCTGATCTTCGCGCCCTAG
PROTEIN sequence
Length: 234
MKLVKLIANLGYGSRKDVTALFRSGRITDADGEVLYADDVVPYETIRVDDEPLDPPPGLVLMLNKPLGVTCSRKDPGRVVYDLLPPRYSVRSPALSSVGRLDRDTSGLLLFTDDGALLHRIISPKAQVTKVYEATLAQDLRGDEGALFASGSLMLESEKEPLAPANLEVLGPRHARLSVTEGRYHQVRRMFAATGNHVETLQRISVGRLALGELPLGEWRALDADEVALIFAP*