ggKbase home page

scnpilot_solids1_trim150_scaffold_301_curated_14

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(16650..17951)

Top 3 Functional Annotations

Value Algorithm Source
TolC family type I secretion outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3A8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 433.0
  • Bit_score: 823
  • Evalue 1.10e-235
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:EIL93949.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 433.0
  • Bit_score: 823
  • Evalue 1.60e-235
type I secretion outer membrane protein, TolC family similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 433.0
  • Bit_score: 756
  • Evalue 4.10e-216

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGCGTTTGAAGCTGCTCACTCTTGCACTGGCCCTGGCCGCCATCTCGCTGCCCAGCCACGGCGAGGATCTGCTGGATGCCTACCGTGAAGCCCGCAACAACGACCCGGTGCTGTCGCAGGCCGACGCCAGCAGGCTGGCGACCGGTGAGGGCGTGACCCAGGCCCGTGCGCAGCTGCTGCCGCAGATCGGCGCCAGCATGAGCCTGAACCAGACCAATGGTGGCGGACAGATCGGCCACAGCCGCTCGCGCACGATCAACGGCACCTTGAGCCAGAGCGTGCTGGACTTCAGCAAGTATGCCAACCTCAAGGCCGCCCACTCGGCTTCCGAGGCCCAGGACGAGCTGTACGCATCCGCCGGGCAGCAACTCTACGTGCGCGTGGTGGCCGCCTACTTCGGCGTGCTGACCAGCGAGGATGGCCTCACCTACGCCAAGGCCAACGAGGACGCGTTCCGCCAGCAGTACGAGCAGTCCGACCAGCGCTTCAAGGTCGGCCTTTCGGCGATCACCGACGTCTACCAGGCCAAGGCGTATTACGAAGCGGCGAAGTCGCAGACGATCGCCGCGCAGAACACCCTCAATGATTCCCGCGAGGCGCTGGCCCAGATCACCGGCAAGCCCACCGGCGACCTGAAGAAGCTGCGCGACGACCTGCCCATGCAGCCGCCGTCACCGGCTGACCAGGACGCCTGGGTCAAGCAGGCGCTGGAGACCAATCCCGACCTGCTCGCCCAGAAGAGCAACGTGGAAACCGCCCAGCACAACATCAGCGCGGCGCGGGCGGCGCATCTGCCCACGATCACCGCCGGCGTGTCCTACGGCAAGGGAGCCGGCTGGTCCGAAGGCAATGCCGCGGCCCGCTATCGCGACCCCGCCTCGACCACGATCGGACTGACCCTCAACGTGCCGATCTTCTCCGGCGGTGCCACGCAGTCACTCGTGCGCCAGTCGATCTACCAGCGCGACGGCGCCGCCGACGCCCTGGAAGCGCAGCGTCGCCAGGTCGTGCGCGACACGCTCAACTACTATCGCTCGGTGATCGCCGGCATCGCCCAGGTCGAATCGGCGAAGGCCTCGGTGGAATCGGGGCGCAAGGCGCTGGAAGCGACCCGCGCCGGGTTCGAGGTCGGCACCCAGACGATGACCAACGTGCTGCTGGCGATCCAGACCCTGACTTCGTCGGAGAGCAGCTACTCGCAGGCGCGGCACCAGTTCATCCTCAACAAGCTGCTGCTCAAGCAGACCGCCGGCACCGCCGACGTGAAGGACATCGAGCAGATCAACGCGTTGCTGCAGTAG
PROTEIN sequence
Length: 434
MRLKLLTLALALAAISLPSHGEDLLDAYREARNNDPVLSQADASRLATGEGVTQARAQLLPQIGASMSLNQTNGGGQIGHSRSRTINGTLSQSVLDFSKYANLKAAHSASEAQDELYASAGQQLYVRVVAAYFGVLTSEDGLTYAKANEDAFRQQYEQSDQRFKVGLSAITDVYQAKAYYEAAKSQTIAAQNTLNDSREALAQITGKPTGDLKKLRDDLPMQPPSPADQDAWVKQALETNPDLLAQKSNVETAQHNISAARAAHLPTITAGVSYGKGAGWSEGNAAARYRDPASTTIGLTLNVPIFSGGATQSLVRQSIYQRDGAADALEAQRRQVVRDTLNYYRSVIAGIAQVESAKASVESGRKALEATRAGFEVGTQTMTNVLLAIQTLTSSESSYSQARHQFILNKLLLKQTAGTADVKDIEQINALLQ*