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scnpilot_solids1_trim150_scaffold_410_curated_16

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(16436..16945)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.8
  • Coverage: 169.0
  • Bit_score: 327
  • Evalue 1.10e-86
peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 169.0
  • Bit_score: 292
  • Evalue 6.60e-77
Peptide deformylase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VXT6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 169.0
  • Bit_score: 327
  • Evalue 7.70e-87

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGTCCGTCTTGTCCATTCTTGAATTCCCCGACCCGCGCCTGCGCACCCGCGCCGAACCGGTGACCGTGTTCGACGCGAAACTGAAGCAGTTCGTCGCCGACATGCTCGAAACCATGTACGCCGCCAACGGCGTCGGTCTTGCCGCCACCCAGGTCAACGTGCATCAGCGCGTGCTGGTGGCCGACATGAGCGACGAACGCAACCAGCCGCTGGCGCTGATCAACGCCCGCATCGTCGAGAAGGACGGCTCGCAGGTCTATCAGGAAGGCTGCCTGTCCTTCCCCGGCCTGTACGCCGACGTGACCCGCGCGCTGGCAGTCAGGGTGCAGGCGCAGGACGTCGACGGCAAGGACATCGTCATCGAGGCCGAAGGCCCGCTGGCCGTGTGCATCCAGCACGAGCTGGATCACCTGGAAGGCAAGGTGTTCGTCGACTACCTGTCACCGCTGAAACGCAGCCTGCTGCTGAAGCGGCTGGAGAAGCACCGCAAGCAGGCGGTCGGTGCTTGA
PROTEIN sequence
Length: 170
MSVLSILEFPDPRLRTRAEPVTVFDAKLKQFVADMLETMYAANGVGLAATQVNVHQRVLVADMSDERNQPLALINARIVEKDGSQVYQEGCLSFPGLYADVTRALAVRVQAQDVDGKDIVIEAEGPLAVCIQHELDHLEGKVFVDYLSPLKRSLLLKRLEKHRKQAVGA*