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scnpilot_solids1_trim150_scaffold_446_curated_15

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(20052..21566)

Top 3 Functional Annotations

Value Algorithm Source
Heavy metal cation tricomponent efflux outer membrane porin ZneC n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1X5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 504.0
  • Bit_score: 952
  • Evalue 1.50e-274
Heavy metal cation tricomponent efflux outer membrane porin ZneC {ECO:0000313|EMBL:EIL93466.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 504.0
  • Bit_score: 952
  • Evalue 2.00e-274
efflux transporter, outer membrane factor lipoprotein, NodT family similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 505.0
  • Bit_score: 757
  • Evalue 2.20e-216

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1515
ATGATCGGACGGGTGCGGTCCCCGGCGCGGCTGCTTGTCGCGGCCATCGTCGCACTGGCGATCGGCGGTTGCGCGGTGGGGCCGGATTTTCATCGGCCGTCTGCGCCGGACATGGCCAGCGTGGCTGCGGGTCCGCTGCCCGCCAGCACGGCCAGCGCGAATGTGGCCGGCGGCCGGGCGCAACATTTCGTCGCCGGCGCGGACATTCCCGCGCAGTGGTGGACGCTGTTCCATTCCACCGCATTGAACGCGCTGGTCGAACAGGCGCTGGCGCACAACGCCGACCTCAAGGCGGCGCAGGCCGCGTTGGACGTGGCGCGCGAAACCACGCGGGCCGGACGCGGCACCCGCTACCCCGGCGTCAGCGTCGGCATGTCGGCCAGCCGCGAGCAGGACCCGCCCGGCGCGCTGGCGCCGGTGCCCAGCAACAACGCGTTCCTGTACAACCTGTTCACCCCGCAGGTCAGCGTGTCGTATGTGCCGGACGTGTTCGGGCTCAACCGGCGCACGCAGGAGTCGCTGCAGGCGCAGCAGCAGGCAGTGCGTTTCCAGATGCTGGCCACGCGCATCACGCTGAGCACCAACGTGGTGGCCGCGGCCGTGCAGCAGGCGTCGTTGCGGGCGCAGGTCGGGGCGACGCGCGAGCTGGTCGGGATCAACGCCCACATGGTGCAGATCCTGCAGTACCAGCGGGACAAGGGTTATGCCGGCGGGCTTGAGCTGGCCGCGCAGCAAGCGCAGCTGGCGCAGGTCAAGGCGAGCCTGCCGTCGCTGCTGACCCAGCTGGAGCAGCAGAACCACTTGTTGGCGGTGCTGGCCGGGCAGTTGCCGGAGCAGGCGTCGTCGCCGTCGTTCGATCTCGCCGCCCTGCAGTTGCCGCAGGCGTTGCCGCTGAGCCTGCCTTCGACGCTGGTGGCGCAACGTCCCGACGTGCGCCAGGCCGAAGCGAACATGCACGCGGCCAGCGCCCAGATCGGCGTGGCCATCGCCAACCGGCTGCCGAACATTTCGCTGAGCGCGAACGCGGGCAGCACGGCGCTGGCGATCAACCAGCTGTTCAAGTCCGGCACCGGCTTCTGGAGCGTGGGCGCGGACCTGGCTGCGCCGATCTTCCAGGGTGGCAGCCTGCTGCATCAGGAACGGGCAGCGAAGGCCGCCTATGTGCAGGCTGCCGAGGAATATCGCGGCACGGTGCTGACCGCATTCCAGAACGTGGCCGACGTGCTGTCAGCGTTGCAGCACGATGCCGAAGGCCTGCAAGCCGTGGCCGGCGCGGAGCAGGCCGCGAAGCTCACCCTGGACCTGTCGCGGCGCCAGTACCAGGCCGGCTACGCCGGCTATCTGTCGCTGCTTTCCGCAGAGCAGGGCTACCAGCAGGCGCGCATCGCGCTGGTGCAGGCACAGGCCAGTCGCTACGCCGACACTGCCGCGCTGTTCCAGGCGCTGGGTGGCGGCTGGTGGCATGCGGACGACGCTTCTTCGGATCAGCCAAGGCACAACCCGGGACATCGATGA
PROTEIN sequence
Length: 505
MIGRVRSPARLLVAAIVALAIGGCAVGPDFHRPSAPDMASVAAGPLPASTASANVAGGRAQHFVAGADIPAQWWTLFHSTALNALVEQALAHNADLKAAQAALDVARETTRAGRGTRYPGVSVGMSASREQDPPGALAPVPSNNAFLYNLFTPQVSVSYVPDVFGLNRRTQESLQAQQQAVRFQMLATRITLSTNVVAAAVQQASLRAQVGATRELVGINAHMVQILQYQRDKGYAGGLELAAQQAQLAQVKASLPSLLTQLEQQNHLLAVLAGQLPEQASSPSFDLAALQLPQALPLSLPSTLVAQRPDVRQAEANMHAASAQIGVAIANRLPNISLSANAGSTALAINQLFKSGTGFWSVGADLAAPIFQGGSLLHQERAAKAAYVQAAEEYRGTVLTAFQNVADVLSALQHDAEGLQAVAGAEQAAKLTLDLSRRQYQAGYAGYLSLLSAEQGYQQARIALVQAQASRYADTAALFQALGGGWWHADDASSDQPRHNPGHR*