ggKbase home page

scnpilot_solids1_trim150_scaffold_320_curated_67

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(71607..71930)

Top 3 Functional Annotations

Value Algorithm Source
Factor for inversion stimulation Fis, transcriptional activator n=2 Tax=Rhodanobacter denitrificans RepID=M4NCL9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 107.0
  • Bit_score: 184
  • Evalue 5.10e-44
Factor for inversion stimulation Fis, transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 107.0
  • Bit_score: 184
  • Evalue 1.60e-44
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 108.0
  • Bit_score: 188
  • Evalue 6.50e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGTCCGTGAATGCCGTAAGACTGCCTGCTGCCGAGCCCGCCAGAGCGGCCTCGTCGCAGAACGCAGGTTCGCCTGGCGCCAGCCACCATGGCCAGAGTGCCCTGAGCGAATGTGTCACCCGCACGGTGCGCCGCTATCTCGCCGATATCGGTGACACCGAGTGTGCCGAAGGCCTCCACGCGCTGGTCCTGCGCGAGGTGGAGGTGCCGCTGTTGCGCGAGGTGCTGGCCTTCCACGACGGCAACCAGAGCCGCGCCGCCAGCGCGCTCGGCATCAACCGCGCCACCCTGCGCAAGAAGCTTGCGGCGCACGGCCTGCTGTAA
PROTEIN sequence
Length: 108
MSVNAVRLPAAEPARAASSQNAGSPGASHHGQSALSECVTRTVRRYLADIGDTECAEGLHALVLREVEVPLLREVLAFHDGNQSRAASALGINRATLRKKLAAHGLL*