ggKbase home page

scnpilot_solids1_trim150_scaffold_1648_curated_7

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(12171..12707)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 1.80e-95
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 85.3
  • Coverage: 177.0
  • Bit_score: 310
  • Evalue 4.20e-82
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2Q4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 178.0
  • Bit_score: 356
  • Evalue 1.20e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCTGATCGCCCTCAACAAGCCTTACGGCGTGCTCTGCCAGTTCACCGATGATCGCGGTCGTCCGACGCTGGCGGATCTTGTCGTGCAAAAGGACGTCTATGCCGCTGGACGGCTGGATCAGGACAGCGAAGGCCTGCTGCTGCTGACCGACGACGGCCGCCTCGCCCATCGACTCACCGATCCCCGCCACAAGCAGGCCAAGACCTATCTGGCGCAGCTCGACGGCAGCATCGATGAGGCGGCGCTGCAGGCGCTTGCGCGAGGCCTGGTGCTGAGCGATGGCCCGACCCTGCCGGCCGAGGCGAAACTGGTCGACGAGCCGGCATGGCTGTGGCCGCGCAAGCCGCCGGTGCGTTTCCGCAAGGCGATCCCGACCAGCTGGATCAGCCTCACGCTGCGCGAAGGACGCAACCGGCAGGTGCGCCGGATGACCGCCGCGGTCGGGTTCCCGACCCTGCGCCTGATCCGCGTGCAGATCGGCGAACACCGGCTCGCCGGCCTCGCTCCGGGCGAGACGCGCGTGCTGGCGGACTGA
PROTEIN sequence
Length: 179
MLIALNKPYGVLCQFTDDRGRPTLADLVVQKDVYAAGRLDQDSEGLLLLTDDGRLAHRLTDPRHKQAKTYLAQLDGSIDEAALQALARGLVLSDGPTLPAEAKLVDEPAWLWPRKPPVRFRKAIPTSWISLTLREGRNRQVRRMTAAVGFPTLRLIRVQIGEHRLAGLAPGETRVLAD*