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scnpilot_solids1_trim150_scaffold_117_curated_34

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(36872..37537)

Top 3 Functional Annotations

Value Algorithm Source
baeR; DNA-binding transcriptional regulator BaeR (EC:2.7.3.-); K07664 two-component system, OmpR family, response regulator BaeR similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 220.0
  • Bit_score: 256
  • Evalue 9.00e-66
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003659D23 similarity UNIREF
DB: UNIREF100
  • Identity: 67.4
  • Coverage: 224.0
  • Bit_score: 297
  • Evalue 8.50e-78
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain protein {ECO:0000313|EMBL:KFC72822.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 221.0
  • Bit_score: 296
  • Evalue 3.50e-77

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Taxonomy

Massilia sp. LC238 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGAGCGCGACCATCCTCATCGTCGAAGACGAAAGCGAACTCGCCGCGATCGTGGCCGACTACGTCACTGCGGCCGGCTACCAGGCGCAGGTGGTCGGCGATGGCCGCGAGGCACTGGCCAGTATCCGGCAACACGTGCCCGACCTGATCGTGCTGGATCTCATGCTGCCGGGTCTCGACGGCCTGTCCCTGTGCAGGACGGTGCGCGGGTTTTCCGCGGTGCCGATCATCATGGTCACCGCGCAGGTGCAGGAGATCGACCGGCTGCTCGGTCTGGAAACCGGCGCCGACGATTACCTGTGCAAGCCCTTCAGCCCGCGCGAGCTGGTTGCCCGCATCAAGGCCGTGTTGCGTCGTGCAGGCCCGGCAGCGCCACCCACGCCACTACTCGAGGTCGACGCCGGTTCGCGCACGGCGCGTATCCACGCGCAAGCGCTGGAGCTGACGCCGACCGAGTTCAGCCTGCTGGCCGCGATGGCCAGACGCCCGGGCACGATCTTCTCGCGTGCGCAGCTGCTCGACCTGCTCAGCCGCGACAACCTTGAAGTCACCGATCGCGCGATCGACAGCCACATCAAGAACCTGCGCCGCAAGCTCGCCGTGCACCTGCCGGAGGTCGACGTGATCCACTCCGTCTACGGACTCGGCTACCGGCTGGAGCTCTGA
PROTEIN sequence
Length: 222
MSATILIVEDESELAAIVADYVTAAGYQAQVVGDGREALASIRQHVPDLIVLDLMLPGLDGLSLCRTVRGFSAVPIIMVTAQVQEIDRLLGLETGADDYLCKPFSPRELVARIKAVLRRAGPAAPPTPLLEVDAGSRTARIHAQALELTPTEFSLLAAMARRPGTIFSRAQLLDLLSRDNLEVTDRAIDSHIKNLRRKLAVHLPEVDVIHSVYGLGYRLEL*