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scnpilot_solids1_trim150_scaffold_117_curated_49

Organism: solids_Rhodanobacter_5

partial RP 37 / 55 MC: 2 BSCG 37 / 51 MC: 2 ASCG 10 / 38
Location: comp(51845..52054)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock DNA-binding domain-containing protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W3P7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 144
  • Evalue 3.80e-32
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:EIL94088.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 69.0
  • Bit_score: 144
  • Evalue 5.30e-32
cold shock protein similarity KEGG
DB: KEGG
  • Identity: 95.7
  • Coverage: 69.0
  • Bit_score: 139
  • Evalue 3.90e-31

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGCGGATCGTGAAGTAGGTACTGTGAAGTGGTTCAATGACGCCAAGGGTTTCGGCTTTATCAGCCGCGATAATGGCCCTGACGTGTTCGTGCATTTTCGCGCCATCACCGGCTCGGGTTTCAAGAGCCTGCAGGAAGGTCAGAAAGTGAGCTTCAATGTCGTGGACGGACAGAAGGGCTTGCAGGCCGAAGACGTTACCCCCGTTTGA
PROTEIN sequence
Length: 70
MADREVGTVKWFNDAKGFGFISRDNGPDVFVHFRAITGSGFKSLQEGQKVSFNVVDGQKGLQAEDVTPV*